Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq24 141 2e-28
seq73 100 5e-16
>seq24
Length=853129
Score = 141 bits (156), Expect = 2e-28
Identities = 352/526 (67%), Gaps = 29/526 (6%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || || || | |||||||||||||| ||||| || | | ||||| |||||
Sbjct 483143 CTGGTAATCACCAACCCGCTTCTCAAAGAAGTTGGTCTTACCAGCGAGTGAGATATTCTC 483202
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACA----CCCGTGTC-AGGCCCATCTGTTCC 47953
||||||| ||||||||| | || || || | ||| | | | | | || |
Sbjct 483203 CATGAAGTCGAAGGGGTTTGCTGACTTGTAGTATTTCTCGTTACCAAG---AGCCGT--C 483257
Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTA-T 48012
| || |||| |||||| ||||||| |||| |||||| | | ||||||||| | |
Sbjct 483258 AAAAGTCGATCAGCGACGAACTCGATATATTGCTTCATGAGAGCGGAGTTCATGCCGAGT 483317
Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072
||| ||| ||| | ||||| ||| | || || | ||| || || ||||| |
Sbjct 483318 AAGGCACAGGGG-AGAGCCTCTGTTAAGAATTCTTGCTCAATGGCAACAGCTTCGGTGAT 483376
Query 48073 AATCTGCTTAACGCGGGACTCTGAGGGTTTG-TTGCGCAGGTGCTTG------GCATAGA 48125
|| | || || | || ||||| ||| || ||||||| | | | |
Sbjct 483377 GATATCCTGGACA---GCCT------GTTTGCTTGGGC-GGTGCTTCAAGTGAGAAAATA 483426
Query 48126 GCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGC 48185
| | ||| |||||||| | |||| ||| ||||| || ||||||| |||| || |||
Sbjct 483427 GAAGGCATGCAAAGTCGGTATGCAGGCCCTCGTCACGAGAGATGAGCTCGTTCGAAAAGG 483486
Query 48186 AGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGA 48245
||||||| ||||| || | || || ||||| || || || || ||||| ||| ||
Sbjct 483487 TCAGACCAGCCATGAGGCCACGCTTCTTCAGCCAAAAGATAGCTGCAAAAGAACCACTGA 483546
Query 48246 AGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGT 48305
|||| ||||| ||||| || ||||| || | | | |||| | | |||||||
Sbjct 483547 AGAAAATGCCTTCCACGGCAGCGAATGCAACCAAACGTTGGGCGAAGGTGGACTTCTTGT 483606
Query 48306 CTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
|| ||||| || ||||| || ||||||||||||||||| ||
Sbjct 483607 CTTGAATCCATCTAACTGCCCAATCGGCCTTCTTCTTGATGCAGGG 483652
>seq73
Length=484926
Score = 100 bits (110), Expect = 5e-16
Identities = 440/681 (65%), Gaps = 24/681 (4%)
Strand=Plus/Minus
Query 213494 GGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAG 213553
||||| |||||| || || ||||| | | || ||| || | ||||| |||||||
Sbjct 51415 GGCCAAGTTGCAGACAGCAACCTCATCCGCAGATGAGTATTCGACAATCTCTGTGCACAA 51356
Query 213554 GTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCA-GAATCCT 213612
|||| || ||||| || |||||||||| ||||| ||| ||| | ||| | |||||
Sbjct 51355 GTTGGAGCTACGGATAGTTCCCAGGTTCTTCTGGTTGCTCTT-GCGGTTGCACGCATCCT 51297
Query 213613 TGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGT 213672
||||||||||| | ||| || ||||| || | | || || |||||| |
Sbjct 51296 TGTAGAGCATGAATGGGTTTCCAGTCTCGGTTTGTGCTTCAAGGATGGAATACCAGAGCT 51237
Query 213673 ACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGC 213731
||||| || | || | || | | | | || ||| |||| ||||| |
Sbjct 51236 TTTGAGCCTTTACG----GTCTTTCGGCCCTTGCCCTCGCGCTCATACTTCTCGTACAAA 51181
Query 213732 TCGTTGAATTCGTGGCCCCAGACC-CTGTCCAGTCCCGGACAGGATGCGGGACACATGAG 213790
| | || || | || |||| ||| | || || ||||| |||||||| ||
Sbjct 51180 GCTTCAAACTCATCTCCGTAGACATCTG-CTAGACCAGGACACTCATTTGGACACATCAG 51122
Query 213791 GCTCCAGTCCCCGTCATCTCTGA-CTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGG 213849
| |||| || |||| | ||| | | |||| |||||| || || || | ||||| ||
Sbjct 51121 GGTCCACTCTCCGTTTT-TCTCAACCCTCTTCATGAAGAGATCGGGAATCCACAAGGCAT 51063
Query 213850 TGAACAGGTCCC-TGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAG 213908
||| || || | || | || || ||| ||| || || | ||||| || ||
Sbjct 51062 AGAAGAGATCGCGTGCACGAACT-TCCTCCTTACCATGATTCTTTCTGAGATCGAGGAAC 51004
Query 213909 TCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG--- 213965
|| |||| || |||||||| ||||| | |||||| |||||||| || || | ||||
Sbjct 51003 TCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACCAGGACGCTTGTTA 50944
Query 213966 CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025
|| || || || || ||||| ||||||| | ||||| | || || | ||
Sbjct 50943 CCACCTTGATCAACATATCTGGCTGTGTTGTTGAAAACACGCAGCATTGGCACAATACCA 50884
Query 214026 TTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGA- 214084
|| || |||||||| || | || || ||||| | || | || | || ||||
Sbjct 50883 TTCGAGAAACCGTTGGTGCCGGAAATGTAGGAGCCAGTAGCTC---GGATTCTG-TGGAT 50828
Query 214085 ---GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCAT 214141
||| || ||||||||||| | ||| || ||||| || || | ||| || ||
Sbjct 50827 ATTGAGACCAATGCCACCGGCATTCTTCGAAATCATAGCACATGTCTTCAGGGTATCATA 50768
Query 214142 GATGCCGGCCATGCTGTCATC 214162
||| || | |||||||| ||
Sbjct 50767 GATACCATCAATGCTGTCTTC 50747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931526279270400
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