Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq24 141 2e-28 seq73 100 5e-16 >seq24 Length=853129 Score = 141 bits (156), Expect = 2e-28 Identities = 352/526 (67%), Gaps = 29/526 (6%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | |||||||||||||| ||||| || | | ||||| ||||| Sbjct 483143 CTGGTAATCACCAACCCGCTTCTCAAAGAAGTTGGTCTTACCAGCGAGTGAGATATTCTC 483202 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACA----CCCGTGTC-AGGCCCATCTGTTCC 47953 ||||||| ||||||||| | || || || | ||| | | | | | || | Sbjct 483203 CATGAAGTCGAAGGGGTTTGCTGACTTGTAGTATTTCTCGTTACCAAG---AGCCGT--C 483257 Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTA-T 48012 | || |||| |||||| ||||||| |||| |||||| | | ||||||||| | | Sbjct 483258 AAAAGTCGATCAGCGACGAACTCGATATATTGCTTCATGAGAGCGGAGTTCATGCCGAGT 483317 Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 ||| ||| ||| | ||||| ||| | || || | ||| || || ||||| | Sbjct 483318 AAGGCACAGGGG-AGAGCCTCTGTTAAGAATTCTTGCTCAATGGCAACAGCTTCGGTGAT 483376 Query 48073 AATCTGCTTAACGCGGGACTCTGAGGGTTTG-TTGCGCAGGTGCTTG------GCATAGA 48125 || | || || | || ||||| ||| || ||||||| | | | | Sbjct 483377 GATATCCTGGACA---GCCT------GTTTGCTTGGGC-GGTGCTTCAAGTGAGAAAATA 483426 Query 48126 GCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGC 48185 | | ||| |||||||| | |||| ||| ||||| || ||||||| |||| || ||| Sbjct 483427 GAAGGCATGCAAAGTCGGTATGCAGGCCCTCGTCACGAGAGATGAGCTCGTTCGAAAAGG 483486 Query 48186 AGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGA 48245 ||||||| ||||| || | || || ||||| || || || || ||||| ||| || Sbjct 483487 TCAGACCAGCCATGAGGCCACGCTTCTTCAGCCAAAAGATAGCTGCAAAAGAACCACTGA 483546 Query 48246 AGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGT 48305 |||| ||||| ||||| || ||||| || | | | |||| | | ||||||| Sbjct 483547 AGAAAATGCCTTCCACGGCAGCGAATGCAACCAAACGTTGGGCGAAGGTGGACTTCTTGT 483606 Query 48306 CTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 || ||||| || ||||| || ||||||||||||||||| || Sbjct 483607 CTTGAATCCATCTAACTGCCCAATCGGCCTTCTTCTTGATGCAGGG 483652 >seq73 Length=484926 Score = 100 bits (110), Expect = 5e-16 Identities = 440/681 (65%), Gaps = 24/681 (4%) Strand=Plus/Minus Query 213494 GGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAG 213553 ||||| |||||| || || ||||| | | || ||| || | ||||| ||||||| Sbjct 51415 GGCCAAGTTGCAGACAGCAACCTCATCCGCAGATGAGTATTCGACAATCTCTGTGCACAA 51356 Query 213554 GTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCA-GAATCCT 213612 |||| || ||||| || |||||||||| ||||| ||| ||| | ||| | ||||| Sbjct 51355 GTTGGAGCTACGGATAGTTCCCAGGTTCTTCTGGTTGCTCTT-GCGGTTGCACGCATCCT 51297 Query 213613 TGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGT 213672 ||||||||||| | ||| || ||||| || | | || || |||||| | Sbjct 51296 TGTAGAGCATGAATGGGTTTCCAGTCTCGGTTTGTGCTTCAAGGATGGAATACCAGAGCT 51237 Query 213673 ACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGC 213731 ||||| || | || | || | | | | || ||| |||| ||||| | Sbjct 51236 TTTGAGCCTTTACG----GTCTTTCGGCCCTTGCCCTCGCGCTCATACTTCTCGTACAAA 51181 Query 213732 TCGTTGAATTCGTGGCCCCAGACC-CTGTCCAGTCCCGGACAGGATGCGGGACACATGAG 213790 | | || || | || |||| ||| | || || ||||| |||||||| || Sbjct 51180 GCTTCAAACTCATCTCCGTAGACATCTG-CTAGACCAGGACACTCATTTGGACACATCAG 51122 Query 213791 GCTCCAGTCCCCGTCATCTCTGA-CTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGG 213849 | |||| || |||| | ||| | | |||| |||||| || || || | ||||| || Sbjct 51121 GGTCCACTCTCCGTTTT-TCTCAACCCTCTTCATGAAGAGATCGGGAATCCACAAGGCAT 51063 Query 213850 TGAACAGGTCCC-TGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAG 213908 ||| || || | || | || || ||| ||| || || | ||||| || || Sbjct 51062 AGAAGAGATCGCGTGCACGAACT-TCCTCCTTACCATGATTCTTTCTGAGATCGAGGAAC 51004 Query 213909 TCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG--- 213965 || |||| || |||||||| ||||| | |||||| |||||||| || || | |||| Sbjct 51003 TCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACCAGGACGCTTGTTA 50944 Query 213966 CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025 || || || || || ||||| ||||||| | ||||| | || || | || Sbjct 50943 CCACCTTGATCAACATATCTGGCTGTGTTGTTGAAAACACGCAGCATTGGCACAATACCA 50884 Query 214026 TTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGA- 214084 || || |||||||| || | || || ||||| | || | || | || |||| Sbjct 50883 TTCGAGAAACCGTTGGTGCCGGAAATGTAGGAGCCAGTAGCTC---GGATTCTG-TGGAT 50828 Query 214085 ---GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCAT 214141 ||| || ||||||||||| | ||| || ||||| || || | ||| || || Sbjct 50827 ATTGAGACCAATGCCACCGGCATTCTTCGAAATCATAGCACATGTCTTCAGGGTATCATA 50768 Query 214142 GATGCCGGCCATGCTGTCATC 214162 ||| || | |||||||| || Sbjct 50767 GATACCATCAATGCTGTCTTC 50747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931526279270400