Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq73 122 4e-23
>seq73
Length=484926
Score = 122 bits (134), Expect = 4e-23
Identities = 190/272 (70%), Gaps = 0/272 (0%)
Strand=Plus/Minus
Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947
||||||||| | | ||| || | |||| |||||| ||| ||| || | ||| ||
Sbjct 51136 ATTTGGACACATCAGGGTCCACTCTCCGTTTTTCTCAACCCTCTTCATGAAGAGATCGGG 51077
Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007
|||||||| ||||| || | ||| | || | | ||| || || || ||||||||| |
Sbjct 51076 AATCCACAAGGCATAGAAGAGATCGCGTGCACGAACTTCCTCCTTACCATGATTCTTTCT 51017
Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067
||||| | ||| || || | ||| | ||||||||| || | ||||||||||| |||
Sbjct 51016 GAGATCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACC 50957
Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127
| || ||||||||||| || ||||| || || | |||||||| || |||
Sbjct 50956 AGGACGCTTGTTACCACCTTGATCAACATATCTGGCTGTGTTGTTGAAAACACGCAGCAT 50897
Query 26128 TGGAACTAATCCAGTTGAAAATCCGTTTGTGC 26159
||| || | ||| | || || ||||| ||||
Sbjct 50896 TGGCACAATACCATTCGAGAAACCGTTGGTGC 50865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253038273002000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |