Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq73 122 4e-23 >seq73 Length=484926 Score = 122 bits (134), Expect = 4e-23 Identities = 190/272 (70%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||||||||| | | ||| || | |||| |||||| ||| ||| || | ||| || Sbjct 51136 ATTTGGACACATCAGGGTCCACTCTCCGTTTTTCTCAACCCTCTTCATGAAGAGATCGGG 51077 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 |||||||| ||||| || | ||| | || | | ||| || || || ||||||||| | Sbjct 51076 AATCCACAAGGCATAGAAGAGATCGCGTGCACGAACTTCCTCCTTACCATGATTCTTTCT 51017 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 ||||| | ||| || || | ||| | ||||||||| || | ||||||||||| ||| Sbjct 51016 GAGATCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACC 50957 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 | || ||||||||||| || ||||| || || | |||||||| || ||| Sbjct 50956 AGGACGCTTGTTACCACCTTGATCAACATATCTGGCTGTGTTGTTGAAAACACGCAGCAT 50897 Query 26128 TGGAACTAATCCAGTTGAAAATCCGTTTGTGC 26159 ||| || | ||| | || || ||||| |||| Sbjct 50896 TGGCACAATACCATTCGAGAAACCGTTGGTGC 50865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253038273002000