Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq73 257 2e-63
seq16 102 1e-16
seq1 86.0 7e-12
>seq73
Length=484926
Score = 257 bits (284), Expect = 2e-63
Identities = 1131/1755 (64%), Gaps = 45/1755 (3%)
Strand=Plus/Plus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
|||||| ||||| ||||||| || || | || ||||| || ||||| ||||| || |
Sbjct 50572 CCCACAACACATGATCATGCGTGTGGCTGTTGGTATCCATGGCGAAGATATTGAATCCGC 50631
Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329
| ||||||||| || |||||| | | ||| |||| || || | || || ||||
Sbjct 50632 AATCGAGACATACAACTTGATGTCGAACAAGTAC-TTCACACATGCTTCTCCTACACTCT 50690
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
||| |||||| || || | |||||||| |||||||| | | | ||||| |
Sbjct 50691 TCAGTGCTGGAACCCCTCAGGCTCAGATGTCATCATGCTTCCTCGTAGATATGAAGGAAG 50750
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449
|| || | |||||||||| || || | | ||||| || || ||| || |
Sbjct 50751 ACAGCATTGATGGTATCTATGATACCCTGAAGACATGTGCTATGATTTCGAAGAATGCCG 50810
Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509
| || ||||| | | ||||| | |||| | | || ||| || || |
Sbjct 50811 GTGGCATTGGTCTCAATATCCACAGAATCCGAGCTACTGGCTCCTACATTTCCGGCACCA 50870
Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569
| ||| || |||||||| | |||||||| || || || ||| |||||| | ||||
Sbjct 50871 ACGGTTTCTCGAATGGTATTGTGCCAATGCTGCGTGTTTTCAACAACACAGCCAGATATG 50930
Query 75570 TAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGGC 75623
| |||||| || | |||| | || || | || ||||| | || |||||||
Sbjct 50931 TTGATCAAGGTGG---TAACAAGCGTCCTGGTGCCTTTGCTATCTACCTTGAGCCATGGC 50987
Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683
| || ||| || | |||||||| || | || || || ||| | || || | ||| |
Sbjct 50988 ACGCTGATGTCTTCGAGTTCCTCGATCTCAGAAAGAATCATGGTAAGGAGGAAGTTCG-T 51046
Query 75684 GTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742
| | | |||||||| | || |||||||||| || || ||||||||| |||||||| |
Sbjct 51047 GCACGCGATCTCTTCTATGCCTTGTGGATTCCCGATCTCTTCATGAAGAGGGTTGAGAAA 51106
Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802
|| | ||| | || | |||||| | || || ||||| | || | ||
Sbjct 51107 AACGGAGAGTGGACCCTGATGTGTCCAAATGAGTGTCCTGGTCTAGCAGATGTCTACGGA 51166
Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTA-GAGCCAATGCGACTGT 75861
|| ||||||||||| | ||| |||||||| ||||| | | ||| | ||| ||
Sbjct 51167 GATGAGTTTGAAGCTTTGTACGAGAAGTATGAGCGCGAGGGCAAGGGCCGAAA-GACCGT 51225
Query 75862 ACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920
| || | | | | | ||| | | || || || |||| || |||||||||| ||||
Sbjct 51226 AA-AGGCTCAAAAGCTCTGGTATTCCATCCTTGAAGCACAAACCGAGACTGGAAACCCAT 51284
Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980
||||| ||||||||||| || ||| ||||| ||||| ||||| ||||||| |||
Sbjct 51285 TCATGCTCTACAAGGATGCGTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACTATCC 51344
Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040
||||| || | ||||| || ||| | || ||| || | ||||||| ||||| |
Sbjct 51345 GTAGCTCCAACTTGTGCACAGAGATTGTCGAATACTCATCTGCGGATGAGGTTGCTGTCT 51404
Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATT 76100
|||| ||||| || || || ||||| | | ||| || | | | | |||| ||| |
Sbjct 51405 GCAACTTGGCCTCTATTGCACTTCCCACCTTTGTGGATATGAACAATGGGACTTATGACT 51464
Query 76101 ATGAAAAACTTCATGAAATC-ACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGAC 76159
| || ||||| ||| || | ||| |||||||||| || | ||| |||| ||
Sbjct 51465 TCCAGAAGCTTCACGAAGTCGTCCAAG-TTGTTACCAAGAACTTGAACAAGATCATCGAT 51523
Query 76160 AGAAATTTTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGG 76218
|| | || ||||| ||| || | ||| || | || || | || ||||
Sbjct 51524 GTTAACTACTACCCCGTCCCAGA-GGCAAGGAAGAGCAACTTCCGTCATCGTCCCATTGC 51582
Query 76219 TTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT--TTGTGCCGCTACGCATTTGATTCA 76276
| ||||| || || | ||||||| ||| || | ||| | | | ||||| |||
Sbjct 51583 AGTTGGTGTACAGGGATTGGCGGATG-CTTTCTTGGCTCTGCGTGTTC-CTTTTGACTCA 51640
Query 76277 GATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAG 76336
||| || ||| | | ||| || ||||| || || || || |||| | ||
Sbjct 51641 CCTGAGGCAAAGCATCTCAATATTCAAATCTTCGAGACTATCTACCACGGTGCTCTTACT 51700
Query 76337 GC--GAGTTGTGAATTGGCTGAAGCCCAA-GGTTCCTATGAGACATTTGAGGGTTCTCCC 76393
|| || | | ||| | ||| || || | |||||||||| ||| || || ||
Sbjct 51701 GCTTCCGTAGAG-CTTGCC--AAGATTAATGGCCCGTATGAGACATATGAAGGATCCCCT 51757
Query 76394 GCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACC--AAGCTCAACTACG 76451
||||| |||| | |||||| | ||||||||||| | || | || || || || |
Sbjct 51758 GCGTCGAAAGGAGAGCTTCAATATGATATGTGGGGA-GTCACTCCTACAGATC-TCTGGG 51815
Query 76452 ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGG 76511
| |||||| | ||| | | |||||| | | || | || ||||||||| || | |
Sbjct 51816 ATTGGGATAGCTTGAAGCAGCAGATCAAGCAACATGGCATCCGCAACAGTCTTCTGGTTG 51875
Query 76512 CACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCAT 76571
| || |||||||| ||| ||| || ||| | ||| || || |||||||| ||||
Sbjct 51876 CTCCTATGCCAACTGCCAGCACTAGCCAGATCCTTGGTTTCAACGAGTGCTTTGAGCCAT 51935
Query 76572 ACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGC 76631
|||| | ||||| ||| | | || ||||| ||||| | || |||
Sbjct 51936 ACACCTCCAACATTTACTCCCGCCGTGTGCTTGCAGGAGAGTTCCAGGTGGTGAACCCTT 51995
Query 76632 ACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGG 76691
|| |||| || || | || || |||||||| | | |||||| | | |||
Sbjct 51996 GGCTTCTCAAGGATCTTGTCGATATGGGACTCTGGTCTGACAACATGAAGAACCGCATTA 52055
Query 76692 TGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCT 76751
| | ||||||||||| || ||||| | | |||||| ||||| ||| |||||
Sbjct 52056 TCGCTGATGGTGGTTCCATCCAGAATATTCCCAACATCCCATCAGATATTAAGGCTCTCT 52115
Query 76752 ACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTG---ACATGGCCGCAGATCGTG 76808
|| || || ||||| || | | | | ||||| | ||||| || || ||||
Sbjct 52116 ACAAGACCGTCTGGGAGAT--TTCTCAGCG-TAACATTGTGCAGATGGCTGCTGACCGTG 52172
Query 76809 GTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTC 76866
|| |||||||||| |||| ||| ||||| | |||| | || || |||
Sbjct 52173 GTGCTTTCATTGATC--AGTCCCAGTCAATGAACATTCACATGAAGGACCCCACCATGGG 52230
Query 76867 CAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTA 76926
|||| || | |||||| | | ||||| | || | || ||||| ||||| ||
Sbjct 52231 CAAGATCACAAGCATGCATTTCACTGGCTGGAAGCTTGGCTTGAAGACCGGCATGTATTA 52290
Query 76927 TCTCCGATCAAAGGC 76941
|||||| ||| |||
Sbjct 52291 TCTCCGCACAATGGC 52305
>seq16
Length=379189
Score = 102 bits (112), Expect = 1e-16
Identities = 163/228 (71%), Gaps = 6/228 (3%)
Strand=Plus/Plus
Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334
||||||||||||||| ||||| || | | | || || ||||| || ||||| ||
Sbjct 192487 TGGTGCCAAGATCCCTCGAGGAGCTATCTTGTCTGGACCTCCTGGTACTGGTAAGACTCT 192546
Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CA 175392
||| ||| || | ||| ||||| || | ||||| ||| || || | || || | |
Sbjct 192547 CCTAGCCAAGGCTACCGCTGGTGAGTCGCAGGTCCCCTTCTTC-AGCG-TCAGCGGTTCC 192604
Query 175393 AACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATC 175452
| || ||||| ||||| || ||||| |||||| || || || |||||||| | | |
Sbjct 192605 GAGTTCGTGGAAATGTTCGTCGGTGTTGGTGCCTCCAGAGTGCGGGATCTCTTCGCTACC 192664
Query 175453 GCCCGCGAAAATCA-ACCATGTATTGTCTTCATTGATGAGATTGATGC 175499
|| | || | || |||||| ||| ||||||| ||||||||||||||
Sbjct 192665 GCAAGA-AAGAGCACACCATGCATTATCTTCATCGATGAGATTGATGC 192711
>seq1
Length=824168
Score = 86.0 bits (94), Expect = 7e-12
Identities = 169/250 (68%), Gaps = 0/250 (0%)
Strand=Plus/Plus
Query 27781 CCAGTAGATCCAAATCCACCCGCACCTCTCTCTGTCTCTTCAAGAACACCAATTTCCTGC 27840
|| ||| ||||||||||||||||||||| | ||||| || | | | | || ||
Sbjct 648217 CCGGTACTTCCAAATCCACCCGCACCTCTAACAGTCTCATCCAATTCCTCCACCTCTTGG 648276
Query 27841 ACATCGGGTGTTTCACAGCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACC 27900
|| || || || | | ||| | ||| | |||||| || ||||| |||| || | |
Sbjct 648277 ACTTCCGGGGTATAGATCCTCTCCAAGACCAATTGTGCAATACGATCGCCTTCTTTGATC 648336
Query 27901 TCAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGA 27960
||| ||||| ||||| ||||||||||| | ||| || || ||| ||| || |
Sbjct 648337 TCATAGTCTACCTCTCCATGATTGAAGAGCAAGACCTTTACAGGTCCTCGATAATCAGCG 648396
Query 27961 TCAATAACACCCGCACCAACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCA 28020
||||| ||||| ||||| ||| ||||| |||||||| || || || ||
Sbjct 648397 TCAATCACACCAGCACCCGTAGAAATTGAGTGCTTAGAGGCGAGACCAGAGCGGGGAGCG 648456
Query 28021 ACACGACCAT 28030
| ||| ||||
Sbjct 648457 ATACGTCCAT 648466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596565424012800
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