Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq46 95.1 2e-14 >seq46 Length=1090308 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||||| | || || || | ||||| ||||| ||| || || ||| Sbjct 104526 ATACCACCACGGAGACGAAGGACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCA 104585 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| |||| || | || || ||||||||||| | | |||||| || || Sbjct 104586 GAGAGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCCGGA 104645 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||| || || || || || || || || || || | ||||||||||| Sbjct 104646 GGAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGACGATTCG 104705 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| || ||||| | || || | ||| || ||||| Sbjct 104706 ACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTGACAAAAATTTGCAT 104755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984472936356000