Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq46 84.2 2e-11
>seq46
Length=1090308
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGA 110331
|||||||| |||||||| ||| | || ||||| ||||| ||| | || || | | | |
Sbjct 104755 ATGCAAATTTTTGTCAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTCGAATCGTCA 104696
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| || | | | | || || |||||| ||||| || || | || ||| ||
Sbjct 104695 -GACACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCGGACCA 104637
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
||| | || || | ||| || || ||||| ||||||| | |||| | | || |||||
Sbjct 104636 ACAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGAACTCTCTCTGACTACAA 104577
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGT 110481
||| |||||||||||||| | ||| ||||
Sbjct 104576 CATCCAAAAAGAATCTACTCTTCACTTGGT 104547
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412838782356080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |