Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq16 102 1e-15 seq24 93.3 7e-13 >seq16 Length=379189 Score = 102 bits (112), Expect = 1e-15 Identities = 88/109 (81%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||| ||||||||||||| || ||||| |||||||| | || ||||| || || || || Sbjct 151282 GCCTCCAACTACCTCGATATTAAGCCGCTCCTCGACGTTGGTTGCAAAACTGTTGCGAAT 151223 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 | |||||||| || || |||||||| || |||||||| |||||||||| Sbjct 151222 ATGATCAAGGGGAAATCCCCCGAGGAGATTCGCAAGACATTTAACATCA 151174 >seq24 Length=853129 Score = 93.3 bits (102), Expect = 7e-13 Identities = 178/261 (68%), Gaps = 1/261 (0%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| ||| || ||||||||||| || ||| Sbjct 483130 TGACACCAGCCTTCTGGTAATCACCAACCCGCTTCTCAAAGAAGTTGGTCTTACCAGCGA 483189 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| |||||| | ||| ||||| || | | ||||| |||||| || | Sbjct 483190 GTGAGATATTCTCCATGAAGTCGAAGGGGTTTGCTGACTTGTAGTATTTCTCGTTACCAA 483249 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | || | || || || |||||||| || || || || |||||| |||| ||||| Sbjct 483250 GAGCCGTCAAAAGTCGATCAGCGACGAACTCGATATATTGCTTCATGAGAGCGGAGTTCA 483309 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||||| | || ||| || | ||| | | || |||| ||| || | || || | Sbjct 483310 TGCCGAGTAAGGCACAGGGGAGAGCCTCTGTTAAGAATTCTTGCTCAATGGCAACAGCTT 483369 Query 794131 CGATGATGATCTGCCTGGGCA 794151 || ||||||| | ||||| || Sbjct 483370 CGGTGATGATAT-CCTGGACA 483389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916186830245840