Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq16 102 1e-15
seq24 93.3 7e-13
>seq16
Length=379189
Score = 102 bits (112), Expect = 1e-15
Identities = 88/109 (81%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||| ||||||||||||| || ||||| |||||||| | || ||||| || || || ||
Sbjct 151282 GCCTCCAACTACCTCGATATTAAGCCGCTCCTCGACGTTGGTTGCAAAACTGTTGCGAAT 151223
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
| |||||||| || || |||||||| || |||||||| ||||||||||
Sbjct 151222 ATGATCAAGGGGAAATCCCCCGAGGAGATTCGCAAGACATTTAACATCA 151174
>seq24
Length=853129
Score = 93.3 bits (102), Expect = 7e-13
Identities = 178/261 (68%), Gaps = 1/261 (0%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| ||| || ||||||||||| || |||
Sbjct 483130 TGACACCAGCCTTCTGGTAATCACCAACCCGCTTCTCAAAGAAGTTGGTCTTACCAGCGA 483189
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| |||||| | ||| ||||| || | | ||||| |||||| || |
Sbjct 483190 GTGAGATATTCTCCATGAAGTCGAAGGGGTTTGCTGACTTGTAGTATTTCTCGTTACCAA 483249
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | || | || || || |||||||| || || || || |||||| |||| |||||
Sbjct 483250 GAGCCGTCAAAAGTCGATCAGCGACGAACTCGATATATTGCTTCATGAGAGCGGAGTTCA 483309
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
|||||| | || ||| || | ||| | | || |||| ||| || | || || |
Sbjct 483310 TGCCGAGTAAGGCACAGGGGAGAGCCTCTGTTAAGAATTCTTGCTCAATGGCAACAGCTT 483369
Query 794131 CGATGATGATCTGCCTGGGCA 794151
|| ||||||| | ||||| ||
Sbjct 483370 CGGTGATGATAT-CCTGGACA 483389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916186830245840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |