Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq46 156 3e-32 seq59 96.9 3e-14 >seq46 Length=1090308 Score = 156 bits (172), Expect = 3e-32 Identities = 922/1457 (63%), Gaps = 19/1457 (1%) Strand=Plus/Minus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 || ||||||||||| | ||| || || || ||||| || || || || | |||| ||| Sbjct 2842 ATTCCATTGGCATCAAGATCGAAGGTAACCTCAATCTGTGGAACACCACGTGGAGCGGGT 2783 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 ||||| || | | || | || || || || || || ||| |||||| Sbjct 2782 GGGATACCGGTAAGCTCGAACTTGCCGAGCAAGTTGTTGTCCTTGGTGCGAGCACGTTCA 2723 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 |||||||| | |||||| || ||| || || || || | || | || ||| | Sbjct 2722 CCCTCGAAGACTTGGATGAGCACACCAGGCTGGTTGTCGGAGAAGGTGGAGAAGACTTCG 2663 Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680 || || || || || || ||||||| ||| | |||||||| |||||||| Sbjct 2662 GACTTCTTGGTTGGGATAGTAGTGTTTCGGGGAATGAGCTTGGTCATCTGGCCACCAGCA 2603 Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTTT 281738 || || | ||| ||||| | || | ||||| | || | || | || | | || Sbjct 2602 GTCTCGATACCGAGAGACAATGGGGCAACATCGAGGAGCAAGATCTCGTTGGTGGACTTG 2543 Query 281739 CATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 281797 | | | | | |||| || ||||| || || | ||||||||| || |||||||| || Sbjct 2542 GAGCTGGTATCACCAGAGAGGATAGCAGCCTGGACAGCAGCACCGTAGGCAACAGCCTCG 2483 Query 281798 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT 281857 || || || | || | || | | || || ||||| |||| | | || | ||| Sbjct 2482 TCGGGGTTGATAGACTTGTTGGGCTCCTTGCCGTTGAAGAAATCGGTGATGAGCT-TCTG 2424 Query 281858 ACCT-TAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCAC-CTGTGATTTAT 281915 | | || ||||| | || || || || | ||||| || || || ||| || || | Sbjct 2423 GATTCTTGGGATACGGGTAGAGCCACCGACGAGGACAATCTCGTGGACGCTG-GACTTGT 2365 Query 281916 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTG 281975 | | || | ||| || || || || || || ||| | ||| || | ||| Sbjct 2364 CGATCTTAGCATCTTGCAAGACACGCTCGACTGGCTCGAGAGTGGATCTGAAGAGGTCCT 2305 Query 281976 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAA 282033 |||||||| |||||| | || | || || || | || || |||| || || | Sbjct 2304 GGCAAAGTTCCTCGAATCTGGCACGGGT--GATGGAAGTGTAGAAGTCAACACCCTCATA 2247 Query 282034 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 282093 | || || | || || | || |||| | |||||| || | ||| || ||||| || Sbjct 2246 GAGGGAGTCGATCTCGATGGAGGTCTGAGCAGCAGAAGAGAGAGTACGCTTGGCACGCTC 2187 Query 282094 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA-ATCTGTTTTATATT 282152 || || || | || | || | || ||| | | || | ||| | || || | Sbjct 2186 GCAAGCAGTTCGGAGACGACGGAGAGCACGTGC-GCTAGAGGAGATATCCTTCTTGTACT 2128 Query 282153 TTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCA 282212 | | |||||| || | || | | || ||||| || || || || |||||||||| Sbjct 2127 TGCGCTTGAACTCGTTGACGAAGTGGTTGACGAGACGGTTGTCGAAGTCCTCACCTCCCA 2068 Query 282213 ATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAG 282272 | | |||| || | || | | |||| ||| | || ||||| | | | || | Sbjct 2067 AGTGGGTATCACCAGCAGTGGACTTGACTTCGAAGATACCTTCTTCGATGGTAAGGAGGG 2008 Query 282273 TAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGT 282332 |||||| ||||||||||| | ||| || || || || || || || | Sbjct 2007 AAACATCGAAAGTTCCACCACCAAGATCGAAGATGAGGACGTTTCGCTCACCCTCAACCT 1948 Query 282333 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 282392 | || || ||||| || |||| |||||| || || || || || || ||||| | ||| | Sbjct 1947 TCTTGTCGAGACCGTAAGCAATAGCAGCCGCGGTGGGCTCGTTGATGATTCTGAGAACGT 1888 Query 282393 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 282452 | | |||||| || || ||||| || ||||| ||||| || || ||||| || || | Sbjct 1887 TCAAACCAGCGATCAAGCCAGCATCCTTGGTGGCCTGTCTCTGGGAGTCGTTGAAGTAGG 1828 Query 282453 CAGGAACAGTAATAACGGCATCTGTT-ACTTCTTTTCCAATATAAGCGCTTGCTGTTTGT 282511 | || || || | ||||| | |||| || |||| || || || || | Sbjct 1827 CTGGGACGGTGACGACGGCGT-TGTTAACGGTACCACCAAGGTAGGCCTCAGCAGTCTCA 1769 Query 282512 TTCAT-TTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCA-T 282569 ||| ||||| || | ||| || || || | |||||||| | ||||||| ||| Sbjct 1768 CGCATCTTTAC-CAAGACCATGGAAGAGATCTCTTCTGGAGTGAACTGCTTGGTCTCACC 1710 Query 282570 TTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAAT 282629 |||| || || |||| || || || | || ||| || ||||| | | Sbjct 1709 CTTGA-ATTGGACCTCAATGAGGGGCTTTCCTCCCTTGTCAACAACCTTGAATGGGAAGT 1651 Query 282630 ATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCAT 282689 |||||||| | || || |||| || || | | ||||| ||||| || |||| Sbjct 1650 GCTTCATATCGGCCTGGACTTCAGGGTCGTTGAACTTGCGGCCAATCAATCGCTTGGCAT 1591 Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 | || | ||| || | || || | || |||||| || || ||||| || |||||| Sbjct 1590 CGAAGACAGTGTTTGCTGCGTTCATGGCGACTTGATTCTTAGCAGCATCACCGATCAGAC 1531 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 | || || || || || | ||| | || || || || || ||||| || || || || | Sbjct 1530 GCTCCGTATCGGTGAAGGCAACGAACGAGGGCGTCGTTCGGTTACCCTGGTCGTTGGCGA 1471 Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869 ||||||| | | | ||| | | | ||||||||||| | || ||||| | ||||| Sbjct 1470 TAATTTCGATTCTGTCATCTCGAAAGACACCTACACAGGAGTAGGTCGTTCCAAGATCAA 1411 Query 282870 TACCAATAGCAATTTTA 282886 |||| |||| || ||| Sbjct 1410 TACCTATAGAGATGTTA 1394 >seq59 Length=381799 Score = 96.9 bits (106), Expect = 3e-14 Identities = 206/305 (68%), Gaps = 6/305 (2%) Strand=Plus/Minus Query 282192 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251 |||| ||||| | ||||||||| | || | || | ||||| | || ||| | | Sbjct 336113 TATCGAAATCCTGACCTCCCAAGTGGGTGTCACCGGCGGTAGCCTTAACAGTGAAGACGC 336054 Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311 || | | | ||| |||| |||||| |||||||| || | ||| | || || | Sbjct 336053 CACCCTGGATGTTCAAGAGAGAAACATCGAAAGTTCCACCGCCGAGATCGTAGATGAGAA 335994 Query 282312 CATTCATTTCTTTGTCTTGGTTTTT----ATCAAGACCATACGCAAAAGCAGCAGCAGTT 282367 |||| || ||| || | |||| | |||||||||| |||| ||| ||||||||| Sbjct 335993 CATTTCGCTCCTTG-CTGGATTTTCCGGCACCAAGACCATAAGCAATAGCGGCAGCAGTT 335935 Query 282368 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 282427 || || || || || | | ||| || |||||||| || || |||||||| || ||| Sbjct 335934 GGCTCGTTGATGATACGGAGAACGTTGAGACCAGCGATGGCACCAGCATCTTTGGTAGCT 335875 Query 282428 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA-CTTCTTT 282486 || | || ||||| || || ||||| ||||| || || || | || | |||||| Sbjct 335874 TGACGCTGGTTGTCGTTGAAGTAGGCAGGGACAGTGATGACAGCCTTGGTGACCTTCTTG 335815 Query 282487 TCCAA 282491 |||| Sbjct 335814 CCCAA 335810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740602906366560