Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq46 82.4 7e-11
>seq46
Length=1090308
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| || || | ||| | || || |||| |||||||||||||| |||||||| ||
Sbjct 104529 CCACCACGGAGACGAAGGACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAG 104588
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| || | || || || || || |||||| |||||||||| || || || |||||
Sbjct 104589 AGAGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCCGGAGGA 104648
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| || || ||||| ||| || || | | || | ||||||| | ||| ||
Sbjct 104649 ATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGACGATTCGACC 104708
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|||| || | |||||||| || | || || || || |||||||||
Sbjct 104709 TCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTGACAAAAATTTGCATA 104756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488540580192000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |