Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq46 89.7 1e-12 >seq46 Length=1090308 Score = 89.7 bits (98), Expect = 1e-12 Identities = 138/196 (70%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || ||||| || || || ||||| | || || ||| || ||||| | Sbjct 104747 TTTTGTCAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTCGAATCGTCAGACACCAT 104688 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| |||||||| || || || |||||| |||||| || | || Sbjct 104687 TGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCGGACCAACAGCGTCT 104628 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||||| || || |||||| | || ||||| | ||| | | || |||||| |||| || Sbjct 104627 GATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGAACTCTCTCTGACTACAACATCCAAAA 104568 Query 206358 AGAGTCTACTCTTCAC 206373 ||| |||||||||||| Sbjct 104567 AGAATCTACTCTTCAC 104552 Score = 87.8 bits (96), Expect = 4e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || || || || |||||||| || || ||||| |||| Sbjct 104513 CAAGACTCTCACTGGTAAGACCATTACCTTGGAAGTTGAGTCGTCCGACACCATCGACAA 104454 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||||| || || || || |||||| || | || || || Sbjct 104453 CGTGAAGTCCAAGATTCAAGATAAGGAGGGTATCCCACCGGACCAACAGCGTCTCATTTT 104394 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || |||||| | || |||||| | |||||| ||| |||||| |||| || ||| Sbjct 104393 CGCTGGCAAGCAGCTCGAGGATGGACGAACTTTGAGCGACTACAACATCCAAAAGGAGAG 104334 Query 206364 TACTCTTCACCTTGTT 206379 ||||| ||| | ||| Sbjct 104333 CACTCTCCACTTGGTT 104318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181812320435760