Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq24 111 2e-18 >seq24 Length=853129 Score = 111 bits (122), Expect = 2e-18 Identities = 218/317 (69%), Gaps = 13/317 (4%) Strand=Plus/Minus Query 1455761 ATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGC 1455820 ||||||| || | ||| ||| | ||||| || ||||| ||||||||||| |||||||| Sbjct 484054 ATCCGCTCTCAACAGATCTGGCAGATGTAT-AAGAAGGCAGAGGCCTCCTTCTGGACCGC 483996 Query 1455821 CGAGGAGGTCGACCTCGGCGCCGA----CACGGTCCACTGGG-TGTCG--CTGAGCGACG 1455873 ||| || | || || | || |||| ||||| | | || | || | Sbjct 483995 CGAAGAAATTGATCTTTCCAAGGATCTCCACG----ACTGGAATAACAGACTAAATGATG 483940 Query 1455874 ACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTG 1455933 | ||||| | || | ||||| ||||| || || ||||||| ||||||||||| Sbjct 483939 ATGAGCGGTACTTTGTGTCTCACGTTCTCGCGTTCTT-CGCCGCCTCGGATGGCATCGTC 483881 Query 1455934 GCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTT 1455993 ||||||| ||| | || || | || || || | || ||||| |||| || Sbjct 483880 AACGAGAACTTGGTTGAGCGTTTCAGTGGTGAAGTGCAGATTCCTGAGGCGCGTTGTTTC 483821 Query 1455994 TACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGAC 1456053 || || ||||||||| || || ||||||||||| || || ||||| |||||||| ||| Sbjct 483820 TATGGTTTCCAGATCATGATGGAGAACATCCACTCAGAGACATACTCCCTCCTGATTGAC 483761 Query 1456054 ACCTACGTCAAGGACCC 1456070 || || |||||||| || Sbjct 483760 ACGTATGTCAAGGAGCC 483744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177757186970720