Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq24 111 2e-18
>seq24
Length=853129
Score = 111 bits (122), Expect = 2e-18
Identities = 218/317 (69%), Gaps = 13/317 (4%)
Strand=Plus/Minus
Query 1455761 ATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGC 1455820
||||||| || | ||| ||| | ||||| || ||||| ||||||||||| ||||||||
Sbjct 484054 ATCCGCTCTCAACAGATCTGGCAGATGTAT-AAGAAGGCAGAGGCCTCCTTCTGGACCGC 483996
Query 1455821 CGAGGAGGTCGACCTCGGCGCCGA----CACGGTCCACTGGG-TGTCG--CTGAGCGACG 1455873
||| || | || || | || |||| ||||| | | || | || |
Sbjct 483995 CGAAGAAATTGATCTTTCCAAGGATCTCCACG----ACTGGAATAACAGACTAAATGATG 483940
Query 1455874 ACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTG 1455933
| ||||| | || | ||||| ||||| || || ||||||| |||||||||||
Sbjct 483939 ATGAGCGGTACTTTGTGTCTCACGTTCTCGCGTTCTT-CGCCGCCTCGGATGGCATCGTC 483881
Query 1455934 GCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTT 1455993
||||||| ||| | || || | || || || | || ||||| |||| ||
Sbjct 483880 AACGAGAACTTGGTTGAGCGTTTCAGTGGTGAAGTGCAGATTCCTGAGGCGCGTTGTTTC 483821
Query 1455994 TACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGAC 1456053
|| || ||||||||| || || ||||||||||| || || ||||| |||||||| |||
Sbjct 483820 TATGGTTTCCAGATCATGATGGAGAACATCCACTCAGAGACATACTCCCTCCTGATTGAC 483761
Query 1456054 ACCTACGTCAAGGACCC 1456070
|| || |||||||| ||
Sbjct 483760 ACGTATGTCAAGGAGCC 483744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177757186970720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |