Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq73 259 7e-64 >seq73 Length=484926 Score = 259 bits (286), Expect = 7e-64 Identities = 1306/2044 (64%), Gaps = 63/2044 (3%) Strand=Plus/Minus Query 68402 TTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATAC 68461 |||| || ||||| ||||| ||||| |||| || || |||| || ||||||||| | Sbjct 52301 TTGTGCGGAGATAATACATGCCGGTCTTCAAGCCAAGCTTCCAGCCAGTGAAATGCATGC 52242 Query 68462 TTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGA 68521 |||| | ||| | || || || ||||| ||||| || || ||||| | Sbjct 52241 TTGTGATCTTGCCCATGGTGGGGTCCTTCATGTGAATGTTCATTGACTGGGACTGATCAA 52182 Query 68522 TGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAG 68581 ||||||| || | || || ||||| | | ||| | |||| ||| ||||| | | Sbjct 52181 TGAAAGCACCACGGTCAGCAGCCATCTGCACAATGTTACGCTGAGAAATCTCCCAGACGG 52122 Query 68582 TCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCG---TATTTTGAATGGATCCACCAT 68638 |||| | | || ||||| ||| | | | | |||| || ||||| ||||||| Sbjct 52121 TCTTGTAGAGAGCCTTAATATCTGATGGGATGTTGGGAATATTCTGGATGGAACCACCAT 52062 Query 68639 CGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAA 68698 | | ||||| ||||| || | ||| ||| | | | || | || | || Sbjct 52061 CAGCGATAATGCGGTTCTTCATGTTGTCAGACCAGAGTCCCATATC-GACAAGATCCTT- 52004 Query 68699 GGAGATGC---GGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATAT 68755 |||| || || || || | || || || || | | ||| | || | |||||| | Sbjct 52003 -GAGAAGCCAAGGGTTCACCACCTGGAACTCTCCTGCAAGCACACGGCGGGAGTAAATGT 51945 Query 68756 TACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTG 68815 | ||| ||||| || | | || || || || || || ||| ||||||| Sbjct 51944 TGGAGGTGTATGGCTCAAAGCACTCGTTGAAACCAAGGATCTGGCTAGTGCTGGCAGTTG 51885 Query 68816 GCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTAT-CTTTTAGA 68874 ||||||| || |||| | ||| || | | |||||| |||| | | ||| || Sbjct 51884 GCATAGGAGCAACCAGAAGACTGTTGCGGATGCCATGTTGCTTGATCTGCTGCTTCAAGC 51825 Query 68875 TGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCG 68934 | | ||||||||| ||||| | || || ||| | ||| ||||| || ||| Sbjct 51824 TATC-CCAATCCCAGAGATCTGTAGGAGTGACTCCCCACATATCATATTGAAGCTCTCCT 51766 Query 68935 TTACTTGCATATGATCCATTATATGTTTCATAAGGTCC-TTCCTGTTCAGCTAGTTC-AC 68992 || ||| ||||| | |||||| ||||| || || || | || || || || || Sbjct 51765 TTCGACGCAGGGGATCCTTCATATGTCTCATACGGGCCATTAATCTTG-GCAAGCTCTAC 51707 Query 68993 --AACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 69050 || || | ||||||| || || || ||||| || | ||||||||| | Sbjct 51706 GGAA---GCAGTAAGAGCACCGTGGTAGATAGTCTCGAAGATTTGAATATTGAGATGCTT 51650 Query 69051 TGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAAC 69110 ||| || | || || ||| | | | | | || ||||| ||||||||||| || Sbjct 51649 TGCCTCAGGTGAGTCAAAAGGAACACGCAGAGCCAAGAAAGCATCCGCCAATCCCTGTAC 51590 Query 69111 CCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCA-GCTTCTGGAATAGGATAAT 69169 |||| | || || | ||| | | ||| ||| | || ||||| | || || | Sbjct 51589 ACCAACTGCAATGGGACGATGACGGA-AGTTGCTCTTCCTTGCCTCTGGGACGGGGTAGT 51531 Query 69170 AATTAATATCTATAATTTTATT-AAGATTTCGGACTACTACTTTAACCACGTCCTTTAGT 69228 | |||| ||| || || || || ||| | | || || |||| || || || | || Sbjct 51530 AGTTAACATCGATGATCTTGTTCAAGTTCTTGGTA-ACAACTTGGACGACTTCGTGAAGC 51472 Query 69229 TTGAGAAAATCAAATCGTCCATCT---ATA---ACAAACATATTCAGTGCTACAGATGCT 69282 || | || ||| | |||| ||| ||||| | ||||| | ||| || Sbjct 51471 TTCTGGAAGTCATAAGTCCCATTGTTCATATCCACAAAGGTGGGAAGTGCAATAGAGGCC 51412 Query 69283 AGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTA 69342 | || || || || ||||||| | | || |||| | |||||||| || | || Sbjct 51411 AAGTTGCAGACAGCAACCTCATCCGCAGATGAGTATTCGACAATCTCTGTGCACAAGTTG 51352 Query 69343 ---CTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTG 69399 |||| |||||| ||||| || | ||| || ||||| ||| || || |||||| Sbjct 51351 GAGCTACG---GATAGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCACGCATCCTTG 51295 Query 69400 TAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACC 69459 || || || || || | ||||| || | || | ||| | || || | ||| || | Sbjct 51294 TAGAGCATGAATGGGTTTCCAGTCTCGGTTTGTGCTTCAAGGATGGAATACCA---GAGC 51238 Query 69460 CT---AGCATTTATTACGGTCTTGTAACGCTT---CTCTTTTTCATA-TTGT-GTATATA 69511 | ||| |||| ||||||| | ||| ||| ||||| || | ||| | | Sbjct 51237 TTTTGAGCCTTTA---CGGTCTTTCGGCCCTTGCCCTCGCGCTCATACTTCTCGTACAAA 51181 Query 69512 GCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCA 69571 || ||| || |||||||| | ||||| | | |||||||| |||||||||||||||| Sbjct 51180 GC--TTCAAACTCATCTCCGTAGACATCTGCTAGACCAGGACACTCATTTGGACACATCA 51123 Query 69572 ATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTA 69631 | |||| | | | | || ||| | ||||| || |||||||||||||| | || | Sbjct 51122 GGGTCCACTCTCCGTTTTTCTCAACCCTCTTCATGAAGAGATCGGGAATCCACA-AGGCA 51064 Query 69632 TA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAAC 69690 || |||||||| | | | | ||| || || || ||| ||| | |||||||| ||| Sbjct 51063 TAGAAGAGATCGCGTGCACGAACTTCCTCCTTACCATGATTCTTTCTGAGATCGAGGAAC 51004 Query 69691 TCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTT 69750 || | | ||||| |||||||| || || || || || | | | || || || || || Sbjct 51003 TCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACCAGGACGCTTGTTA 50944 Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810 || || ||||| | |||||||| ||||| || | || | |||||| || | ||||||| Sbjct 50943 CCACCTTGATCAACATATCTGGCTGTGTTGTTGAAAACACGCAGCATTGGCACAATACCA 50884 Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870 || || ||| || || || ||||| || || | || || || | ||| Sbjct 50883 TTCGAGAAACCGTTGGTGCCGGAAATGTAGGAGCCAGTAGCTCGGATTCTGTGGATATTG 50824 Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930 ||||| || || || || | || || || | |||||| |||| || ||||| ||| Sbjct 50823 AGACCAATGCCACCGGCATTCTTCGAAATCATAGCACATGTCTTCAGGGTATCATAGATA 50764 Query 69931 CCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATA 69990 || || ||||| || || |||| | | || || || ||||| ||| || Sbjct 50763 CCATCAATGCTGTCTTCCTTCATATCTACGAGGAAGCATGATGACATCTGAGCCTGAGGG 50704 Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 ||||| ||| | || | ||||||||| || || ||||| | || | || | || ||| Sbjct 50703 GTTCCAGCACTGAAGAGTGTAGGAGAAGCATGTGTGAAGTACTTGTTCGACATCAAGTTG 50644 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 ||||| || || || ||||| ||||| ||| || || | || |||||||| | | Sbjct 50643 TATGTCTCGATTGCGGATTCAATATCTTCGCCATGGATACCAACAGCCACACGCATGATC 50584 Query 70111 ATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGA 70170 || || || || || || ||| ||||| | | |||||||| |||| Sbjct 50583 ATGTGTTGTGGGCGCTCAACCACGGCGTTATTAAGACGGAGGAGGTATGAACGCTCCAAT 50524 Query 70171 GTTTTAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTA 70228 || || || |||||||| | ||| ||||| || | ||||| | ||| | ||||| | Sbjct 50523 GTCTTGAATCCAAAATATTGGTAGTTGAAA--TCACGATCGTAGACAATCGCTGAATTGA 50466 Query 70229 GTTTATCCTTATATTTGGTAACTATATCC--ATAACAGTAGGTGAGATAATCGGAGATCG 70286 | | ||| | ||| | || | || | || | || | ||||| || || ||| | Sbjct 50465 GCTCTGCCTCGTGTTTCATGAC-ACATTCGTATGTCTGT-TGAGAGATCATGGGCGATGG 50408 Query 70287 TTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTA-AATAGtt 70345 || ||||| || |||||||| | | | | |||| || || || | ||| | | Sbjct 50407 CTTGCCATTGCGTGGGTTAACATAATGGTAGAGATCTGAGATGAC-GGACGAGAATTGCT 50349 Query 70346 tttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAG 70405 | || || | |||||| | ||| || | ||| || | || || ||||| ||||| || | Sbjct 50348 TCTTGGTCTGCTTGTGGAGATTGGAAACGGCGATACGAGCCGCGAGAATGGCATAATCTG 50289 Query 70406 GATG 70409 |||| Sbjct 50288 GATG 50285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686903991638400