Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq73 259 7e-64
>seq73
Length=484926
Score = 259 bits (286), Expect = 7e-64
Identities = 1306/2044 (64%), Gaps = 63/2044 (3%)
Strand=Plus/Minus
Query 68402 TTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATAC 68461
|||| || ||||| ||||| ||||| |||| || || |||| || ||||||||| |
Sbjct 52301 TTGTGCGGAGATAATACATGCCGGTCTTCAAGCCAAGCTTCCAGCCAGTGAAATGCATGC 52242
Query 68462 TTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGA 68521
|||| | ||| | || || || ||||| ||||| || || ||||| |
Sbjct 52241 TTGTGATCTTGCCCATGGTGGGGTCCTTCATGTGAATGTTCATTGACTGGGACTGATCAA 52182
Query 68522 TGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAG 68581
||||||| || | || || ||||| | | ||| | |||| ||| ||||| | |
Sbjct 52181 TGAAAGCACCACGGTCAGCAGCCATCTGCACAATGTTACGCTGAGAAATCTCCCAGACGG 52122
Query 68582 TCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCG---TATTTTGAATGGATCCACCAT 68638
|||| | | || ||||| ||| | | | | |||| || ||||| |||||||
Sbjct 52121 TCTTGTAGAGAGCCTTAATATCTGATGGGATGTTGGGAATATTCTGGATGGAACCACCAT 52062
Query 68639 CGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAA 68698
| | ||||| ||||| || | ||| ||| | | | || | || | ||
Sbjct 52061 CAGCGATAATGCGGTTCTTCATGTTGTCAGACCAGAGTCCCATATC-GACAAGATCCTT- 52004
Query 68699 GGAGATGC---GGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATAT 68755
|||| || || || || | || || || || | | ||| | || | |||||| |
Sbjct 52003 -GAGAAGCCAAGGGTTCACCACCTGGAACTCTCCTGCAAGCACACGGCGGGAGTAAATGT 51945
Query 68756 TACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTG 68815
| ||| ||||| || | | || || || || || || ||| |||||||
Sbjct 51944 TGGAGGTGTATGGCTCAAAGCACTCGTTGAAACCAAGGATCTGGCTAGTGCTGGCAGTTG 51885
Query 68816 GCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTAT-CTTTTAGA 68874
||||||| || |||| | ||| || | | |||||| |||| | | ||| ||
Sbjct 51884 GCATAGGAGCAACCAGAAGACTGTTGCGGATGCCATGTTGCTTGATCTGCTGCTTCAAGC 51825
Query 68875 TGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCG 68934
| | ||||||||| ||||| | || || ||| | ||| ||||| || |||
Sbjct 51824 TATC-CCAATCCCAGAGATCTGTAGGAGTGACTCCCCACATATCATATTGAAGCTCTCCT 51766
Query 68935 TTACTTGCATATGATCCATTATATGTTTCATAAGGTCC-TTCCTGTTCAGCTAGTTC-AC 68992
|| ||| ||||| | |||||| ||||| || || || | || || || || ||
Sbjct 51765 TTCGACGCAGGGGATCCTTCATATGTCTCATACGGGCCATTAATCTTG-GCAAGCTCTAC 51707
Query 68993 --AACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 69050
|| || | ||||||| || || || ||||| || | ||||||||| |
Sbjct 51706 GGAA---GCAGTAAGAGCACCGTGGTAGATAGTCTCGAAGATTTGAATATTGAGATGCTT 51650
Query 69051 TGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAAC 69110
||| || | || || ||| | | | | | || ||||| ||||||||||| ||
Sbjct 51649 TGCCTCAGGTGAGTCAAAAGGAACACGCAGAGCCAAGAAAGCATCCGCCAATCCCTGTAC 51590
Query 69111 CCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCA-GCTTCTGGAATAGGATAAT 69169
|||| | || || | ||| | | ||| ||| | || ||||| | || || |
Sbjct 51589 ACCAACTGCAATGGGACGATGACGGA-AGTTGCTCTTCCTTGCCTCTGGGACGGGGTAGT 51531
Query 69170 AATTAATATCTATAATTTTATT-AAGATTTCGGACTACTACTTTAACCACGTCCTTTAGT 69228
| |||| ||| || || || || ||| | | || || |||| || || || | ||
Sbjct 51530 AGTTAACATCGATGATCTTGTTCAAGTTCTTGGTA-ACAACTTGGACGACTTCGTGAAGC 51472
Query 69229 TTGAGAAAATCAAATCGTCCATCT---ATA---ACAAACATATTCAGTGCTACAGATGCT 69282
|| | || ||| | |||| ||| ||||| | ||||| | ||| ||
Sbjct 51471 TTCTGGAAGTCATAAGTCCCATTGTTCATATCCACAAAGGTGGGAAGTGCAATAGAGGCC 51412
Query 69283 AGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTA 69342
| || || || || ||||||| | | || |||| | |||||||| || | ||
Sbjct 51411 AAGTTGCAGACAGCAACCTCATCCGCAGATGAGTATTCGACAATCTCTGTGCACAAGTTG 51352
Query 69343 ---CTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTG 69399
|||| |||||| ||||| || | ||| || ||||| ||| || || ||||||
Sbjct 51351 GAGCTACG---GATAGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCACGCATCCTTG 51295
Query 69400 TAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACC 69459
|| || || || || | ||||| || | || | ||| | || || | ||| || |
Sbjct 51294 TAGAGCATGAATGGGTTTCCAGTCTCGGTTTGTGCTTCAAGGATGGAATACCA---GAGC 51238
Query 69460 CT---AGCATTTATTACGGTCTTGTAACGCTT---CTCTTTTTCATA-TTGT-GTATATA 69511
| ||| |||| ||||||| | ||| ||| ||||| || | ||| | |
Sbjct 51237 TTTTGAGCCTTTA---CGGTCTTTCGGCCCTTGCCCTCGCGCTCATACTTCTCGTACAAA 51181
Query 69512 GCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCA 69571
|| ||| || |||||||| | ||||| | | |||||||| ||||||||||||||||
Sbjct 51180 GC--TTCAAACTCATCTCCGTAGACATCTGCTAGACCAGGACACTCATTTGGACACATCA 51123
Query 69572 ATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTA 69631
| |||| | | | | || ||| | ||||| || |||||||||||||| | || |
Sbjct 51122 GGGTCCACTCTCCGTTTTTCTCAACCCTCTTCATGAAGAGATCGGGAATCCACA-AGGCA 51064
Query 69632 TA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAAC 69690
|| |||||||| | | | | ||| || || || ||| ||| | |||||||| |||
Sbjct 51063 TAGAAGAGATCGCGTGCACGAACTTCCTCCTTACCATGATTCTTTCTGAGATCGAGGAAC 51004
Query 69691 TCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTT 69750
|| | | ||||| |||||||| || || || || || | | | || || || || ||
Sbjct 51003 TCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACCAGGACGCTTGTTA 50944
Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810
|| || ||||| | |||||||| ||||| || | || | |||||| || | |||||||
Sbjct 50943 CCACCTTGATCAACATATCTGGCTGTGTTGTTGAAAACACGCAGCATTGGCACAATACCA 50884
Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870
|| || ||| || || || ||||| || || | || || || | |||
Sbjct 50883 TTCGAGAAACCGTTGGTGCCGGAAATGTAGGAGCCAGTAGCTCGGATTCTGTGGATATTG 50824
Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930
||||| || || || || | || || || | |||||| |||| || ||||| |||
Sbjct 50823 AGACCAATGCCACCGGCATTCTTCGAAATCATAGCACATGTCTTCAGGGTATCATAGATA 50764
Query 69931 CCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATA 69990
|| || ||||| || || |||| | | || || || ||||| ||| ||
Sbjct 50763 CCATCAATGCTGTCTTCCTTCATATCTACGAGGAAGCATGATGACATCTGAGCCTGAGGG 50704
Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050
||||| ||| | || | ||||||||| || || ||||| | || | || | || |||
Sbjct 50703 GTTCCAGCACTGAAGAGTGTAGGAGAAGCATGTGTGAAGTACTTGTTCGACATCAAGTTG 50644
Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110
||||| || || || ||||| ||||| ||| || || | || |||||||| | |
Sbjct 50643 TATGTCTCGATTGCGGATTCAATATCTTCGCCATGGATACCAACAGCCACACGCATGATC 50584
Query 70111 ATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGA 70170
|| || || || || || ||| ||||| | | |||||||| ||||
Sbjct 50583 ATGTGTTGTGGGCGCTCAACCACGGCGTTATTAAGACGGAGGAGGTATGAACGCTCCAAT 50524
Query 70171 GTTTTAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTA 70228
|| || || |||||||| | ||| ||||| || | ||||| | ||| | ||||| |
Sbjct 50523 GTCTTGAATCCAAAATATTGGTAGTTGAAA--TCACGATCGTAGACAATCGCTGAATTGA 50466
Query 70229 GTTTATCCTTATATTTGGTAACTATATCC--ATAACAGTAGGTGAGATAATCGGAGATCG 70286
| | ||| | ||| | || | || | || | || | ||||| || || ||| |
Sbjct 50465 GCTCTGCCTCGTGTTTCATGAC-ACATTCGTATGTCTGT-TGAGAGATCATGGGCGATGG 50408
Query 70287 TTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTA-AATAGtt 70345
|| ||||| || |||||||| | | | | |||| || || || | ||| | |
Sbjct 50407 CTTGCCATTGCGTGGGTTAACATAATGGTAGAGATCTGAGATGAC-GGACGAGAATTGCT 50349
Query 70346 tttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAG 70405
| || || | |||||| | ||| || | ||| || | || || ||||| ||||| || |
Sbjct 50348 TCTTGGTCTGCTTGTGGAGATTGGAAACGGCGATACGAGCCGCGAGAATGGCATAATCTG 50289
Query 70406 GATG 70409
||||
Sbjct 50288 GATG 50285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686903991638400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |