Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq73 268 1e-66
seq24 98.7 1e-15
seq16 98.7 1e-15
>seq73
Length=484926
Score = 268 bits (296), Expect = 1e-66
Identities = 910/1396 (65%), Gaps = 35/1396 (3%)
Strand=Plus/Plus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280
|||||| ||||| ||||||| ||||| | ||||| ||||| ||||| ||||| || |
Sbjct 50572 CCCACAACACATGATCATGCGTGTGGCTGTTGGTATCCATGGCGAAGATATTGAATCCGC 50631
Query 104281 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 104339
| ||||||||| || |||||| | | ||| |||| || || | || || ||||
Sbjct 50632 AATCGAGACATACAACTTGATGTCGAACAAGTAC-TTCACACATGCTTCTCCTACACTCT 50690
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
||| |||||| || || | || ||||| |||||||| | | | ||||| |
Sbjct 50691 TCAGTGCTGGAACCCCTCAGGCTCAGATGTCATCATGCTTCCTCGTAGATATGAAGGAAG 50750
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
|| || | |||||||||| || || | | ||||| || || ||| || |
Sbjct 50751 ACAGCATTGATGGTATCTATGATACCCTGAAGACATGTGCTATGATTTCGAAGAATGCCG 50810
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519
| || ||||| | | ||||| | |||| | | || ||| || || |
Sbjct 50811 GTGGCATTGGTCTCAATATCCACAGAATCCGAGCTACTGGCTCCTACATTTCCGGCACCA 50870
Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579
| ||| || |||||||| | |||||||| || || || ||| |||||| | ||||
Sbjct 50871 ACGGTTTCTCGAATGGTATTGTGCCAATGCTGCGTGTTTTCAACAACACAGCCAGATATG 50930
Query 104580 TAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633
| |||||| ||| ||||| || | | || |||| |||||||||||||
Sbjct 50931 TTGATCAAGGTGGTAACAAGCGTCCT---GGTGCCTTTGCTATCTACCTTGAGCCATGGC 50987
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693
|||| ||| || | |||||||| || | | || || ||| | ||||| | | ||
Sbjct 50988 ACGCTGATGTCTTCGAGTTCCTCGATCTCAGAAAGAATCATGGTAAGGAGGAAGTTC-GT 51046
Query 104694 GC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752
|| ||||||||||||| || | |||||||| ||||||||||||||||| |||||| |
Sbjct 51047 GCACGCGATCTCTTCTATGCCTTGTGGATTCCCGATCTCTTCATGAAGAGGGTTGAGAAA 51106
Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812
| || | ||| | || | |||||| | || |||||||| | |||| | ||
Sbjct 51107 AACGGAGAGTGGACCCTGATGTGTCCAAATGAGTGTCCTGGTCTAGCAGATGTCTACGGA 51166
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGG--TCGGGCGACTGCGACGG 104870
|| ||||||||||| | ||| ||||| ||| || || || ||| ||| |
Sbjct 51167 GATGAGTTTGAAGCTTTGTACGAGAAGTATGAGCGCGAGGGCAAGGGCCGA--AAGACCG 51224
Query 104871 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930
| ||| | | ||| | | || || | | |||||||||||||| | ||||
Sbjct 51225 TAAAGGCTCAAAAGCTCTGGTATTCCATCCTTGAAGCACAAACCGAGACTGGAAACCCAT 51284
Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990
|||||| ||||| || || || |||| ||||| || || ||||| |||| |||
Sbjct 51285 TCATGCTCTACAAGGATGCGTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACTATCC 51344
Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050
|| ||||| | || ||||| || | |||| || |||||| ||||| |
Sbjct 51345 GTAGCTCCAACTTGTGCACAGAGATTGTCGAATACTCATCTGCGGATGAGGTTGCTGTCT 51404
Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAA--AGACATTTGA 105108
| ||| | || || || || || |||| | ||||||| | |||| ||| | |||
Sbjct 51405 GCAACTTGGCCTCTATTGCACTTCCCACCTTTGTGGAT--ATGAACAATGGGACTTATGA 51462
Query 105109 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168
| | || || |||||||| || ||| ||||| ||| | |||| | || ||
Sbjct 51463 CTTCCAGAAGCTTCACGAAGTCGTCCAAGTTGTTACCAAGAACTTGAACAAGATCATCGA 51522
Query 105169 TAGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227
| || | |||||||| ||| || | || || | | || ||||| ||||
Sbjct 51523 TGTTAACTACTACCCCGTCCCAGA-GGCAAGGAAGAGCAACTTCCGTCATCGTCCCATTG 51581
Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATTCC 105286
| ||||| ||||| | ||||||| ||| | || || || | ||||| ||
Sbjct 51582 CAGTTGGTGTACAGGGATTGGCGGATGCTTTCTTGGCTCTG-CGTGTTCCTTTTGACTCA 51640
Query 105287 GACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAG 105346
|| || ||| | ||||| | || || ||||| || || |||| ||||||
Sbjct 51641 CCTGAGGCAAAGCATCTCAATATTCAAATCTTCGAGACTATCTACCACGGTGCTCTTACT 51700
Query 105347 GCGAGTTC---AGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCA 105403
|| ||| |||| | || || || |||| || ||||| || | ||| || || ||
Sbjct 51701 GC---TTCCGTAGAGCTTGCCAAGATTAATGGCCCGTATGAGACATATGAAGGATCCCCT 51757
Query 105404 GCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACC-AAGCTTCACTACGA 105462
|| || |||| | |||||||| ||||||||||| | || | || | || || ||
Sbjct 51758 GCGTCGAAAGGAGAGCTTCAATATGATATGTGGGGA-GTCACTCCTACAGATCTCTGGGA 51816
Query 105463 CTGGGA-AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGG 105521
||||| |||| | ||| | | |||||| | | || | || |||||||| || | |
Sbjct 51817 TTGGGATAGCT-TGAAGCAGCAGATCAAGCAACATGGCATCCGCAACAGTCTTCTGGTTG 51875
Query 105522 CTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCT 105581
|||| |||||||| ||| ||| || ||| | ||| || || |||||||| || |
Sbjct 51876 CTCCTATGCCAACTGCCAGCACTAGCCAGATCCTTGGTTTCAACGAGTGCTTTGAGCCAT 51935
Query 105582 ACACGACGAACATCTA 105597
|||| | ||||| ||
Sbjct 51936 ACACCTCCAACATTTA 51951
>seq24
Length=853129
Score = 98.7 bits (108), Expect = 1e-15
Identities = 283/429 (66%), Gaps = 26/429 (6%)
Strand=Plus/Minus
Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGG 94886
|| || || || |||||| |||||| || ||| ||||| | |||||| |||||||| ||
Sbjct 483562 GTGGAAGGCATTTTCTTCAGTGGTTCTTT-TGCAGCTATCTTTTGGCTGAAGAAGCGTGG 483504
Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCA 94946
|||||| | ||||| ||| || |||||||| ||||||||||||||||| || ||
Sbjct 483503 CCTCATGGCTGGTCTGACCTTTTCGAACGAGCTCATCTCTCGTGACGAGGGCCTGCATAC 483444
Query 94947 AGAGTTTGCGGTGGAACTTTTCAAATTATTGCGTATTAA------ACCAACGACTGAGAC 95000
|| ||||| || ||| | ||| | | | || |||| | || |
Sbjct 483443 CGACTTTGC-ATG--CCTTCT---ATTTTCTCACTTGAAGCACCGCCCAAGCAAACAGGC 483390
Query 95001 TATTCATTCTATTGTTAAGGAAGCCGTTGAGATTGAGAAAGGATTCATATTGGATGCCCT 95060
| | || ||| | | ||||| |||| |||||| ||| |||| || || || ||
Sbjct 483389 TGTCCAGGATATCATCACCGAAGCTGTTGCCATTGAGCAAGAATTCTTAACAGAGGCTCT 483330
Query 95061 TCCATGCGCTCTCATCGGTATGAATTCTGAAAAAATGTCTGAATATATTGAGTATGTATC 95120
|| || || | |||| ||||| || | ||| ||||||| |||| || |
Sbjct 483329 CCCCTGTGCCTTACTCGGCATGAACTCCGCTCTCATGAAGCAATATATCGAGTTCGTCGC 483270
Query 95121 TGATAGATTGTTGAAGCAGATCGGGGTGCCTCCAATTTGGAACTCCAAG------AATCC 95174
|||| || | |||| | | || ||| | || | ||| |||| || ||
Sbjct 483269 TGATCGACTTTTGA--CGGCTCTTGGTAACGAGAAAT----ACTACAAGTCAGCAAACCC 483216
Query 95175 ATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAGAGGGT 95234
|| |||||||||||||| || |||| || ||||| |||||||| || ||| ||||
Sbjct 483215 CTTCGACTTCATGGAGAATATCTCACTCGCTGGTAAGACCAACTTCTTTGAGAAGCGGGT 483156
Query 95235 TGGGGACTA 95243
||| || ||
Sbjct 483155 TGGTGATTA 483147
>seq16
Length=379189
Score = 98.7 bits (108), Expect = 1e-15
Identities = 276/416 (66%), Gaps = 16/416 (4%)
Strand=Plus/Minus
Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583
||||| || || || ||||| | |||||| | ||| |||| ||| | |||||| |
Sbjct 192897 CGATCGAAACGTCCAGGACGCATGAGCGCTTTATCCAGGACATCTGGTCTATTCGTACCA 192838
Query 9584 GCGATGACAACAATACCTGTTTC--ATTATCAAAACCATCCATCTCTGTCAAAAGTTGGT 9641
|| | ||| || | | |||| | | ||| ||||||||||| || ||||| | || |
Sbjct 192837 GCAAGGACCACGA--CTTGTTCCGAAGTATTGAAACCATCCATTTCAGTCAAGATCTGAT 192780
Query 9642 TAATAGTTTGTTCCCGTTCATCATT-----CGCTGGCATA-CCACCAGCACTGCGTTGCT 9695
| | || ||| |||||||| | ||||| | || || | || |
Sbjct 192779 TGAGGGTGGCTTCTCGTTCATCCGTTCCACCGCTGAAGTTGCCGCCTTTGCCACGAGATT 192720
Query 9696 TTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGT-TGATTTTCGCGAGCGACT 9754
| || | |||||||||||||| ||||||| ||||||||| || | || | |||
Sbjct 192719 TACCAATTGCATCAATCTCATCGATGAAGATAATGCATGGTGTGCTCTTT-CTTGCGGTA 192661
Query 9755 TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG-- 9812
| ||||||||||| || | ||| || ||||| || ||||| ||||| || | |
Sbjct 192660 GCGAAGAGATCCCGCACTCTGGAGGCACCAACACCGACGAACATTTCCACGAACTCGGAA 192601
Query 9813 CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 9872
| || || | || ||||||||| | || ||||| || | || ||| || ||||
Sbjct 192600 CCGCTGACGCT--GAAGAAGGGGACCTGCGACTCACCAGCGGTAGCCTTGGCTAGGAGAG 192543
Query 9873 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 9928
||||||| ||||| || || | | || || ||||| || |||||||| |||
Sbjct 192542 TCTTACCAGTACCAGGAGGTCCAGACAAGATAGCTCCTCGAGGGATCTTGGCACCA 192487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583256717174400
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