Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq46 105 6e-18 >seq46 Length=1090308 Score = 105 bits (116), Expect = 6e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 ||||||||| | || |||||||| || || | |||||| | || || | || || Sbjct 104959 ACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCCGACACCATCGACAACGTTAAGAGC 104900 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || || |||||||| || ||||| || || |||||||||||| | || | ||| ||||| Sbjct 104899 AAGATCCAAGACAAGGAGGGCATCCCCCCGGATCAACAGCGTCTCATCTTCGCTGGCAAG 104840 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || | || ||| | ||| ||||||| || ||||| || |||||||| ||| | ||| Sbjct 104839 CAGCTCGAGGACGGCCGAACCCTTTCCGACTATAACATCCAGAAGGAGTCTACCCTTCAT 104780 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | || | ||| | || || || || Sbjct 104779 CTTGTCCTCCGTCTTCGTGGCGGTAT 104754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434915355571200