Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20fermentans_20[genbank_20GCA_5F002233575.1_202017-07-25] 3,822 sequences; 31,278,289 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1321 87.8 4e-12 >seq1321 Length=24731 Score = 87.8 bits (96), Expect = 4e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 230470 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAA 230529 ||| | |||||||| ||||| || |||||||| | | || || || || |||||||| Sbjct 19372 ATGTGCCAGTACATGGAATTTGTGGCCGACCGGCTCGTCGTCGCGCTCGGCTACGAGAAG 19431 Query 230530 GTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACC 230589 ||||| | | | ||||| || | | ||||||||||| ||||| || || ||| || Sbjct 19432 CTGTACCATGCCACCAACCCGTTCGACTGGATGGAGCTCATCTCGCTGCAGGGCAAGGCC 19491 Query 230590 AACTTCTTCGA 230600 ||||||||||| Sbjct 19492 AACTTCTTCGA 19502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057772199019860