Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20fermentans_20[genbank_20GCA_5F002233575.1_202017-07-25]
3,822 sequences; 31,278,289 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq2414 95.1 2e-14
>seq2414
Length=19474
Score = 95.1 bits (104), Expect = 2e-14
Identities = 182/264 (69%), Gaps = 6/264 (2%)
Strand=Plus/Minus
Query 94779 GTGGATGCCGAGTCCTCCAGCAGTCTTGGAGAT--GATTGCCGCCTCCTTAAGAGTATCA 94836
||||| || | || || |||||||||||||| || || | ||| || || ||
Sbjct 2001 GTGGAGACCAATACCGCCGGCAGTCTTGGAGATCTGAGCGCAGGT--CTTGAGGGTGTCG 1944
Query 94837 TAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGT 94896
|| || || ||||| || || | | | | | ||||||||| || || | || |
Sbjct 1943 TAGATGCCATCAATCGAGTCGTCCTTCATGGCGACAAGGAAGCAAGATGACATCTGAGC- 1885
Query 94897 GTGACT-GTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACAT 94955
|||| || ||| || || || || || ||||| ||||| || ||| || ||||||
Sbjct 1884 GTGAGGAGTACCAGCGTTGAAGAGGGTAGGCGAAGCGTGGGTGAAGTAGCGCTCCGACAT 1825
Query 94956 GAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACG 95015
||| | ||| || || |||||| | ||||| ||||| || ||||| | ||||||
Sbjct 1824 GAGGTTATAGGTCTCGATGACACGGTCGATGTTGTCGCCGTGGATACCGACGGACACACG 1765
Query 95016 CATAATCATGTCCTGAGGGCGCTC 95039
||||| ||||| ||| ||||||||
Sbjct 1764 CATAAGCATGTGCTGCGGGCGCTC 1741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989535540690010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |