Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20fermentans_20[genbank_20GCA_5F002233575.1_202017-07-25] 3,822 sequences; 31,278,289 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq1908 82.4 6e-11 >seq1908 Length=40588 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/137 (74%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 21138 GACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGATTTTGGTG 21197 ||||||||| || || |||| ||| ||||| | | || ||| || ||||| || | | Sbjct 7911 GACGTTGCCGAGGTCACCGATGTGGCGCTCAGAGTCGGTGGGGGCACCGTGCTTCTTGC- 7853 Query 21198 CGTAGGG-TTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGT 21256 ||| ||| || ||||| ||||||| || ||||||||||| | ||| ||||||| || Sbjct 7852 CGTGGGGGTTGAAGTGGGCGCCGGCCGAGGTGCAGCCGTTCGAGAGGTCACCGAACTGGT 7793 Query 21257 GAACGTGAAAGCCGTGC 21273 | | ||| |||||| || Sbjct 7792 GGATGTGGAAGCCGCGC 7776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414553488939868