Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20fermentans_20[genbank_20GCA_5F002233575.1_202017-07-25]
3,822 sequences; 31,278,289 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq1908 82.4 6e-11
>seq1908
Length=40588
Score = 82.4 bits (90), Expect = 6e-11
Identities = 102/137 (74%), Gaps = 2/137 (1%)
Strand=Plus/Minus
Query 21138 GACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGATTTTGGTG 21197
||||||||| || || |||| ||| ||||| | | || ||| || ||||| || | |
Sbjct 7911 GACGTTGCCGAGGTCACCGATGTGGCGCTCAGAGTCGGTGGGGGCACCGTGCTTCTTGC- 7853
Query 21198 CGTAGGG-TTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGT 21256
||| ||| || ||||| ||||||| || ||||||||||| | ||| ||||||| ||
Sbjct 7852 CGTGGGGGTTGAAGTGGGCGCCGGCCGAGGTGCAGCCGTTCGAGAGGTCACCGAACTGGT 7793
Query 21257 GAACGTGAAAGCCGTGC 21273
| | ||| |||||| ||
Sbjct 7792 GGATGTGGAAGCCGCGC 7776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414553488939868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |