Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20fermentans_20[genbank_20GCA_5F002233575.1_202017-07-25]
3,822 sequences; 31,278,289 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1321 95.1 2e-14
>seq1321
Length=24731
Score = 95.1 bits (104), Expect = 2e-14
Identities = 149/213 (70%), Gaps = 14/213 (7%)
Strand=Plus/Minus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
|| ||||| ||| ||||| |||||||| | || || |||||||| || |||||
Sbjct 19199 CAGGCGAAGTCGGTGTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGG 19140
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
||| |||| || |||||||| || ||||| || |||| |||||||| || || ||||||
Sbjct 19139 CCGCGCATCAGACCACGCTTCTTGAGCCAGAAGATGGCCGCGAATGAGCCCGAGAAGAAG 19080
Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTC-------CATAACCGGCGCTGTC 33476
|| || || || |||||||| || || | | | |||| | || |||
Sbjct 19079 ATGCCCTCAACACACGCAAAGGCGATCAGACGCGTGCGGAAGGGCATATCTGG---TGTG 19023
Query 33477 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33509
||||| ||| | ||||| |||||||||||
Sbjct 19022 ATGTA----CTTGAGCGCCCAGTCGGCCTTCTT 18994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622917438697520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |