Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20fermentans_20[genbank_20GCA_5F002233575.1_202017-07-25] 3,822 sequences; 31,278,289 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq2686 82.4 6e-11 >seq2686 Length=8065 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| | || | || || || || || |||||||| || Sbjct 6560 ATACCACCACGAAGGCGAAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCC 6619 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || || || || || |||||| ||||||||||||| ||||| || Sbjct 6620 GAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGG 6679 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | |||||||| || || Sbjct 6680 GGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGACGACTCC 6739 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| || || || || || || |||||||| Sbjct 6740 ACCTCGAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 6789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420114829877064