Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20fermentans_20[genbank_20GCA_5F002233575.1_202017-07-25] 3,822 sequences; 31,278,289 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1321 95.1 3e-14 >seq1321 Length=24731 Score = 95.1 bits (104), Expect = 3e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 243585 CATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAA 243644 |||| | |||||||| ||||| || |||||||| | || ||||||| || || ||||| Sbjct 19371 CATGTGCCAGTACATGGAATTTGTGGCCGACCGGCTCGTCGTCGCGCTCGGCTACGAGAA 19430 Query 243645 AGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAAC 243704 ||||| | ||| ||||| || | || ||||||||||| ||||| || || || | Sbjct 19431 GCTGTACCATGCCACCAACCCGTTCGACTGGATGGAGCTCATCTCGCTGCAGGGCAAGGC 19490 Query 243705 TAACTTCTTCGA 243716 ||||||||||| Sbjct 19491 CAACTTCTTCGA 19502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102825992655700