Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20fermentans_20[genbank_20GCA_5F002233575.1_202017-07-25]
3,822 sequences; 31,278,289 total letters
Query= NC_015323.1
Length=45667
Score E
Sequences producing significant alignments: (Bits) Value
seq3434 84.2 6e-12
>seq3434
Length=7857
Score = 84.2 bits (92), Expect = 6e-12
Identities = 122/170 (72%), Gaps = 2/170 (1%)
Strand=Plus/Minus
Query 978 CGGCACTTATGGGAGAATCGCTCCTCGCTCGGGATTGGCTGCAAAGTTCTTTATAGATGT 1037
|||||| || ||| | ||||||||||||||||| | || || ||| || || ||
Sbjct 7336 CGGCACGTACGGGCGTATCGCTCCTCGCTCGGGTCTCGCGGCGAAGCACTCGATCGACAC 7277
Query 1038 GGGGGCGGGTGTGATAGATGCTGATTATCGCGGTGAAGTGAAGGTGCTCTTGTTCAATTT 1097
||| || || || || || || || || ||||| ||||| ||||||||| ||||||| |
Sbjct 7276 GGGCGCCGGCGTCATCGACGCCGACTACCGCGGCGAAGTCAAGGTGCTCCTGTTCAA-CT 7218
Query 1098 TTCGCAAC-ATGCGTTCAACGTTCGGAAGGGAGACCGTATCGCTCAGCTC 1146
| || || | || ||| ||||| ||||||||||| ||||||
Sbjct 7217 ATGGCGACTCGGACTTTGCCGTGGCTAAGGGCGACCGTATCGCGCAGCTC 7168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146006173026556
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |