Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20fermentans_20[genbank_20GCA_5F002233575.1_202017-07-25] 3,822 sequences; 31,278,289 total letters Query= NC_015323.1 Length=45667 Score E Sequences producing significant alignments: (Bits) Value seq3434 84.2 6e-12 >seq3434 Length=7857 Score = 84.2 bits (92), Expect = 6e-12 Identities = 122/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 978 CGGCACTTATGGGAGAATCGCTCCTCGCTCGGGATTGGCTGCAAAGTTCTTTATAGATGT 1037 |||||| || ||| | ||||||||||||||||| | || || ||| || || || Sbjct 7336 CGGCACGTACGGGCGTATCGCTCCTCGCTCGGGTCTCGCGGCGAAGCACTCGATCGACAC 7277 Query 1038 GGGGGCGGGTGTGATAGATGCTGATTATCGCGGTGAAGTGAAGGTGCTCTTGTTCAATTT 1097 ||| || || || || || || || || ||||| ||||| ||||||||| ||||||| | Sbjct 7276 GGGCGCCGGCGTCATCGACGCCGACTACCGCGGCGAAGTCAAGGTGCTCCTGTTCAA-CT 7218 Query 1098 TTCGCAAC-ATGCGTTCAACGTTCGGAAGGGAGACCGTATCGCTCAGCTC 1146 | || || | || ||| ||||| ||||||||||| |||||| Sbjct 7217 ATGGCGACTCGGACTTTGCCGTGGCTAAGGGCGACCGTATCGCGCAGCTC 7168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146006173026556