Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20fermentans_20[genbank_20GCA_5F002233575.1_202017-07-25] 3,822 sequences; 31,278,289 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq180 86.0 1e-11 >seq180 Length=11059 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| || ||||| || ||||| || || || || || || | | ||| Sbjct 10736 ACGGAGGACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGACC 10795 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||| || || || ||||| || ||||| || | || || || ||||| || || ||||| Sbjct 10796 GTCCTCGAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGAATACCCTCCTT 10855 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || || ||||| | || || || || || || || | || || || | ||| || Sbjct 10856 GTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGAGTGAT 10915 Query 82775 CGTCTTGCCTGT 82786 ||||||||| || Sbjct 10916 CGTCTTGCCGGT 10927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981779120535658