Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20fermentans_20[genbank_20GCA_5F002233575.1_202017-07-25]
3,822 sequences; 31,278,289 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq180 86.0 1e-11
>seq180
Length=11059
Score = 86.0 bits (94), Expect = 1e-11
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| || ||||| || ||||| || || || || || || | | |||
Sbjct 10736 ACGGAGGACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGACC 10795
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||| || || || ||||| || ||||| || | || || || ||||| || || |||||
Sbjct 10796 GTCCTCGAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGAATACCCTCCTT 10855
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| || ||||| | || || || || || || || | || || || | ||| ||
Sbjct 10856 GTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGAGTGAT 10915
Query 82775 CGTCTTGCCTGT 82786
||||||||| ||
Sbjct 10916 CGTCTTGCCGGT 10927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981779120535658
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |