Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20fermentans_20[genbank_20GCA_5F002233575.1_202017-07-25] 3,822 sequences; 31,278,289 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3769 100 3e-16 >seq3769 Length=13229 Score = 100 bits (110), Expect = 3e-16 Identities = 109/144 (76%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 51732 GCCTCGACATTGCCCAAGTCGCCGACGTGGCGCATCGCCGCGTTCGGAGCGCCGTGGTCG 51791 ||||||| ||||| | ||||||||||||||| || | || |||| ||| |||| ||| Sbjct 9969 GCCTCGATGTTGCCGAGGTCGCCGACGTGGCGGTTCCGCTCGGTCGGCGCGGCGTGCTCG 10028 Query 51792 CTGCCGGTGGGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGT---TGCTGGTGTCGCCG 51848 | | | ||||||| |||| |||| | || |||||||||| || | |||||||| Sbjct 10029 CGGTTGAAGGGGTTGTAGTGCCCGCCGGTGGAGGTGCAGCCGTCGGTGAAGATGTCGCCG 10088 Query 51849 AATTCGTGCACGTGGAATCCGTGC 51872 || |||| |||||||| |||||| Sbjct 10089 AAGGCGTGGACGTGGAAGCCGTGC 10112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476588429899920