Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20fermentans_20[genbank_20GCA_5F002233575.1_202017-07-25]
3,822 sequences; 31,278,289 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1321 86.0 9e-12
>seq1321
Length=24731
Score = 86.0 bits (94), Expect = 9e-12
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
|||||||||||| || | |||||| || | || | ||||| || || |||||
Sbjct 19200 GCAGGCGAAGTCGGTGTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAG 19141
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|| |||| ||||||||||| |||||||| || ||||| || || || || || |||||
Sbjct 19140 GCCGCGCATCAGACCACGCTTCTTGAGCCAGAAGATGGCCGCGAATGAGCCCGAGAAGAA 19081
Query 39736 GATGCCTTCTAC 39747
|||||| || ||
Sbjct 19080 GATGCCCTCAAC 19069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686875982932080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |