Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20fermentans_20[genbank_20GCA_5F002233575.1_202017-07-25]
3,822 sequences; 31,278,289 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq2686 104 5e-17
seq180 84.2 5e-11
>seq2686
Length=8065
Score = 104 bits (114), Expect = 5e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || || || || || ||||| || ||||||||||| || | | || | || ||
Sbjct 6578 AGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 6637
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || |||||||| || | ||||||||| | | ||| || ||||| ||
Sbjct 6638 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 6697
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || ||||| | || | | |||| || ||| || || || || |||||
Sbjct 6698 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATAGTC 6757
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||||||||| ||||| ||||||| ||||||
Sbjct 6758 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 6789
>seq180
Length=11059
Score = 84.2 bits (92), Expect = 5e-11
Identities = 136/194 (70%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| || || || |||||||| || ||||||||||| || | | || | || ||
Sbjct 10739 GAGGACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGACCGTC 10798
Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
|| || ||||| || |||||||| || | ||||||||| | | || || |||||
Sbjct 10799 CTCGAGCTGCTTT--CCCGCGAAGATGAGACGCTGCTGGTCGGGAGGAATACCCTCCTTG 10856
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
|| || || || ||||| | || | | |||| || ||| || || ||||| ||
Sbjct 10857 TCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGAGTGATC 10916
Query 152070 GTTTTGCCCGTGAG 152083
|| ||||| |||||
Sbjct 10917 GTCTTGCCGGTGAG 10930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153764298116562
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |