Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20fermentans_20[genbank_20GCA_5F002233575.1_202017-07-25]
3,822 sequences; 31,278,289 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq2686 125 5e-24
seq180 111 1e-19
>seq2686
Length=8065
Score = 125 bits (138), Expect = 5e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || |||||| ||||||||||| || | || ||| |||| ||
Sbjct 6581 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 6640
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||| | ||||||||| || | || | || ||||| |||
Sbjct 6641 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 6700
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||||| || |||||||| | || || |||||
Sbjct 6701 ATCTTGGACTTGACGTTGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTTG 6760
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||||||||| |||||||| |||||
Sbjct 6761 CCCGTGAGGGTCTTGACGAAGATCTGCAT 6789
>seq180
Length=11059
Score = 111 bits (122), Expect = 1e-19
Identities = 138/189 (73%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| ||||| |||||| ||||||||||| || | || ||| |||| ||
Sbjct 10743 ACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGACCGTCCTCG 10802
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||| | ||||||||| || | ||| | ||| ||||| |||
Sbjct 10803 AGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGG 10862
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|||||| ||| | | | |||||||| | || || ||||| | || ||||||||
Sbjct 10863 ATCTTCGACTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGAGTGATCGTCTTG 10922
Query 44309 CCCGTGAGG 44317
|| ||||||
Sbjct 10923 CCGGTGAGG 10931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359973631422174
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |