Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq165 239 4e-58 >seq165 Length=247000 Score = 239 bits (264), Expect = 4e-58 Identities = 568/846 (67%), Gaps = 23/846 (3%) Strand=Plus/Minus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| || ||| ||||||||||||||||| || || || || ||| || |||||| Sbjct 138071 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAGGGATATATTT 138012 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAG-TAT-TTATCGCATCCCAATTCCAACA 16061 ||||| |||||||| |||||| || ||| || ||| || ||||| || || | | | Sbjct 138011 TCCATGAAATCAAATGGATTTGTT--ACATTAAATATCTTTTCGCAACCTAAAGCTACTA 137954 Query 16062 ATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTA 16121 ||| |||||| || || ||||| | ||| || ||||| || ||| ||||| |||| || Sbjct 137953 ATAGTCTATCAGCAACGAATTCAACATATTGATTCATCAAGTCAGCATTCATACCTAATA 137894 Query 16122 ATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTC---AATGA 16178 || ||| || || || || | || | | ||||| || | ||| ||||| ||||| Sbjct 137893 ATGCAACTGGAATGGCATCAATGAAGTATCTCTTTTCAATTTCAACTGCTTCTGAAATGA 137834 Query 16179 TTATATCTCTTACTACACTATTT--AAC-GGAGGGTTTAATAAGTGTTTAAACATTATAC 16235 || ||| | ||| | ||| | | || ||| || || |||| | || Sbjct 137833 TT------CTTTCAACAATCTTTGGATCTGGCTTGTTCTTCAAATGAGAGAACAACAAAC 137780 Query 16236 AAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGAC 16295 ||||||| ||| || || |||||||| || | ||||| || || || ||||| | || Sbjct 137779 AAGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAAATTAATTCATTGGAGAATGTCAAAC 137720 Query 16296 CTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATA 16355 | ||||| | ||| || || | ||| || || || ||||| || || || ||||| | Sbjct 137719 CAGGCATCAAACCTTTCTTCTTCAACCAGAAGATGGCAGCAAAGGATCCTGAGAAGAAGA 137660 Query 16356 TACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttcta 16415 ||| ||||| || || || ||||||| || || | || || || || | Sbjct 137659 CACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCGGCAAACAAGGCATCCTTGTCTTGGA 137600 Query 16416 tccattttttagcccaatttgctttttgtttAACA-CAGTTCATGTTCTCTATTGCATTA 16474 ||||| | ||||||| | || |||| ||| | ||| ||| | ||||| ||||| Sbjct 137599 TCCATCTGATAGCCCATTCGGCCTTTTCTTTGATTTCAGGA-ATGGTTTCTATGGCATTG 137541 Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534 |||||| | | ||||| || || || || || || | | ||| || || Sbjct 137540 AATAAAAATTCGTTTTCCTTAGGGTCCTTGATGTATGTGTCCAACAACAAAGAGTATGTT 137481 Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594 ||||| ||||| || ||||| || || |||||||| || || ||||||| | ||| Sbjct 137480 TCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTAGCTTCTGGAATT 137421 Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654 || ||||||| |||| | || ||||||| || || || || ||||| || ||| Sbjct 137420 TGAACTTCAGCTGAAAAGTTCTCAACTAAGTTCTCATTGACAATACCATCAGAGGCAGCA 137361 Query 16655 AAAAACGCAAGTA-TGTGTTTAATAAAAtttttttCGTTATCTGAAAGT---TTTAACCA 16710 || || || | || | || |||||| | |||| || || | | || ||| Sbjct 137360 AAGAAAGCTAATACTCTGGA-AATAAAGAATCTTTCATTCTCGTTCATTCTGTTGTTCCA 137302 Query 16711 GTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTT 16770 |||| |||||||| |||||||| | ||||| | ||||||||||| || | || | Sbjct 137301 GTCATGTAAATCTTTAGATAAATCAATTTCTTCAGCCGTCCAAAAAGATGCTTCTGCTCT 137242 Query 16771 TTTATA 16776 |||||| Sbjct 137241 TTTATA 137236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462510797468800