Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq165 302 4e-77 >seq165 Length=247000 Score = 302 bits (334), Expect = 4e-77 Identities = 591/861 (69%), Gaps = 23/861 (3%) Strand=Plus/Minus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 ||||| || ||| ||||| |||||||||||||| || ||||| | || ||||||||| Sbjct 138071 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAGGGATATATTT 138012 Query 13973 TCCATAAAATCAAATGGATTTGTTGACAT-AAACACTTTATCACAACCTAGTTCTAATAG 14031 ||||| |||||||||||||||||| |||| ||| | || || ||||||| ||| || Sbjct 138011 TCCATGAAATCAAATGGATTTGTT-ACATTAAATATCTTTTCGCAACCTAAAGCTACTAA 137953 Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 || |||||| |||| ||| |||| ||||||| ||| || ||| ||||||||||| || Sbjct 137952 TAGTCTATCAGCAACGAATTCAACATATTGATTCATCAAGTCAGCATTCATACCTAATAA 137893 Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151 | || ||||| || | || || ||||| || || || || || || Sbjct 137892 TGCAACTGGAATGGCATCAATGAAGTATCTCTTTTCAATTTCAACTGCTTCTGAAATGAT 137833 Query 14152 AATCGTAATAATTTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGCA 14209 | || ||| | || || | | || | | ||| || | ||||| ||| Sbjct 137832 TCTTTCAACAATCT--TTGGATCTGGCTTGTTCTTCAAATGAGAGAACAACAAACAAGCA 137775 Query 14210 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 14269 || ||| || | || || ||||| | ||| | ||| || || ||||| || || ||| Sbjct 137774 AAGTCAGTGTGTAAACCTTCGTCTCTGCAAATTAATTCATTGGAGAATGTCAAACCAGGC 137715 Query 14270 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 14329 ||||| ||| || || ||||| || || ||||| || ||||| || ||||| | ||| Sbjct 137714 ATCAAACCTTTCTTCTTCAACCAGAAGATGGCAGCAAAGGATCCTGAGAAGAAGACACCC 137655 Query 14330 TCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCAT 14389 ||||| ||||| || || | | || ||| ||||| | || | |||| |||||| Sbjct 137654 TCAACAGCAGCGAAAGCAACCAGTCTTTCGGCAAACAAGGCATCCTTGTCTTGGATCCAT 137595 Query 14390 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAA 14449 | |||||||||| | |||| ||| || | || ||||| || ||||| |||||| Sbjct 137594 CTGATAGCCCATTCGGCCTTTTCTTTGATTTCAGGAATGGTTTCTATGGCATTGAATAAA 137535 Query 14450 TGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATC-AATAAGTAAGCTATACATTTCA 14506 ||| || || |||| | ||||| ||||||| || || || ||| || |||| Sbjct 137534 AATTCGTTTTCCTTAGGGTCCTTGA--TGTATGTGTCCAACAACAAAGAG-TATGTTTCT 137478 Query 14507 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT 14566 ||||| ||||||||||| || || |||||||| ||||| ||||||||| ||| Sbjct 137477 GAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTAGCTTCTGGAATTTGA 137418 Query 14567 ACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAA 14626 || || | |||| | || | || || ||||| || ||||||||| || ||||| Sbjct 137417 ACTTCAGCTGAAAAGTTCTCAACTAAGTTCTCATTGACAATACCATCAGAGGCAGCAAAG 137358 Query 14627 AATGCCAATATGTTTTTAATAAAGTAT------TGCTC-TTCATTGCTGAGTTTTTTCCA 14679 || || |||| | ||||||| || | ||| |||||| ||| || ||||| Sbjct 137357 AAAGCTAATACTCTGGAAATAAAGAATCTTTCATTCTCGTTCATT-CTG---TTGTTCCA 137302 Query 14680 ATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTT 14739 || |||||| ||||| | ||| | ||| ||| | ||||||||| || | ||| | Sbjct 137301 GTCATGTAAATCTTTAGATAAATCAATTTCTTCAGCCGTCCAAAAAGATGCTTCTGCTCT 137242 Query 14740 TTTATACATTACCCATATTTC 14760 |||||| | |||| ||||| Sbjct 137241 TTTATAAGCTTCCCAGATTTC 137221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482344345901440