Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq70 143 5e-29 seq165 140 6e-28 >seq70 Length=104368 Score = 143 bits (158), Expect = 5e-29 Identities = 361/536 (67%), Gaps = 17/536 (3%) Strand=Plus/Minus Query 35095 AGAACATCAATATTTGAACCTAGTCAGGGAGATCCTAGAAAGAGGAGTGAAGAAGGAC-- 35152 ||||| ||||||||| | ||| || | ||| | ||||| |||| || ||| Sbjct 64220 AGAACTTCAATATTTAGATCTATGTAGAAATATCATCGAAAGCGGAG--AATCCAGACCA 64163 Query 35153 GATAGAACTGGAACAGGAACTCTATCCATTTTTGG---ACCCCAAATGAGGTTCTCTCTT 35209 |||||||| || ||||| || |||| || |||| ||| ||| |||||||||| || Sbjct 64162 GATAGAACAGGTACAGGTACATTATCTATATTTGCTCCACCACAATTGAGGTTCTCCCTG 64103 Query 35210 CGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAA 35269 ||||| ||| |||| | | || || |||||| | ||| | || || | | Sbjct 64102 AGAGACAACAAGTTTCCCTTGTTGACAACAAAGAAAGTATTCACAAAAGCCATTATACTA 64043 Query 35270 GAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATA 35329 ||| | |||||||| | ||| |||| || |||| | | ||| | || | | Sbjct 64042 GAATTGCTTTGGTTCATTAAGGGTGATACCAACAACAAA--ACTCTACAAAAGGATGGTG 63985 Query 35330 C--ACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATA 35387 | || ||| | | |||||| || || |||| ||| ||| | ||| ||| |||| Sbjct 63984 TTAAGATTTGGGATGGTAATGGCTCTCGTGAATATTTAGACTCTCTAGGATTAACTGATA 63925 Query 35388 GAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAAT 35447 ||| ||| || |||||||| || || ||||| ||||||||| | || ||||||||||| | Sbjct 63924 GAGAAGAAGGCGATTTGGGTCCAGTTTACGGCTTCCAATGGAGACACTTTGGTGCTGAGT 63865 Query 35448 ATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAA 35507 ||| | |||| | ||||| ||||| |||||| ||| ||| || | | || | Sbjct 63864 ATGTTGACTGTCACACGGATTACACTGGTAAGGGTTATGACCAACTGAGCGAGATCATCC 63805 Query 35508 AGACCCTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATG 35566 | | || | ||| || ||| |||| ||||| || || ||| | || ||||| ||| Sbjct 63804 ATAAGCT-AAAGACCAACCCATATGACAGAAGAATCATCATGTCTGCTTGGAACCCTCCA 63746 Query 35567 GATCTTC-ACCTTATGGCTCTTCCTCCATGCCACATG-ACTGCTCAATTTTATGTG 35620 || |||| | |||||||| || ||||| || || |||| || ||||| ||| Sbjct 63745 GA-CTTCAAGAAAATGGCTCTACCCCCATGTCATGTGTTCTGC-CAGTTTTACGTG 63692 >seq165 Length=247000 Score = 140 bits (154), Expect = 6e-28 Identities = 343/510 (67%), Gaps = 19/510 (4%) Strand=Plus/Plus Query 101855 AAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGATTTG---GCGGAA 101911 ||||| |||| | |||||||| | ||||| ||| ||| | | ||| || ||| Sbjct 137570 AAGAA-AAGGCCGAATGGGCTATCAGATGGATCCAAGACAAGGATGCCTTGTTTGCCGAA 137628 Query 101912 CTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATT 101971 | | ||||| || ||||| ||||| || ||||||| || | || || |||| Sbjct 137629 AGACTGGTTGCTTTCGCTGCTGTTGAGGGTGTCTTCTTCTCAGGATCCTTTGCTGCCATC 137688 Query 101972 TTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCT 102031 |||||| | ||||| | ||| | |||||||| | || | ||||||||| || |||| Sbjct 137689 TTCTGGTTGAAGAAGAAAGGTTTGATGCCTGGTTTGACATTCTCCAATGAATTAATTTGC 137748 Query 102032 AGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGAT 102091 || ||||||||| | || |||||||| || || |||| | |||| || Sbjct 137749 AGAGACGAAGGTTTACACACTGACTTTGCTTGTTTGTTGTTCTCTCA----TTTGAAGAA 137804 Query 102092 ACCCCATCAAGAGA-AAGGATTCTTGAAATTGTCACT---GAAGCCGTCCGAATTGAACA 102147 | | | ||| || |||| |||||| ||| | ||||| || ||||||| | Sbjct 137805 ---CAAGCCAGATCCAAAGATTGTTGAAAGAATCATTTCAGAAGCAGTTGAAATTGAA-A 137860 Query 102148 AGAATTTCT-CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCA-AGTTGATG 102205 ||| | || || | | || | || ||| |||| | || ||||| ||| | |||||| Sbjct 137861 AGAGATACTTCATTGATGCCATTCCAGTTGCATTATTAGGTATGAA-TGCTGACTTGATG 137919 Query 102206 AGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCAC 102265 | || || ||||||| || || |||| |||||| || | | || |||||| Sbjct 137920 AATCAATATGTTGAATTCGTTGCTGATAGACTATTAGTAGCTTTAGGTTGCGAAAAGATA 137979 Query 102266 TATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAAC 102325 | |||||| || || || || |||||||| ||||| ||||| | |||||||||| Sbjct 137980 TTTAATGTAACAAATCCATTTGATTTCATGGAAAATATATCCCTAGCTGGTAAGACCAAC 138039 Query 102326 TTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355 || |||||||||||||| | || || ||| Sbjct 138040 TTCTTTGAAAAGAGAGTATCTGATTACCAA 138069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581362758640