Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq115 459 3e-124 seq165 291 1e-73 >seq115 Length=88618 Score = 459 bits (508), Expect = 3e-124 Identities = 1389/2127 (65%), Gaps = 59/2127 (3%) Strand=Plus/Minus Query 62163 ATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 62222 || || || ||||| || || |||||| ||||||||| || || |||||||| | Sbjct 52769 ATGTGAATGTTCATGGAATGTGATTGATCAATGAAGGCTTGTCTATCAGCAGCCATGTCA 52710 Query 62223 ATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 62281 ||||| |||||||||| | ||||||| || || || || || ||| || |||| ||| Sbjct 52709 ATGATGGTCTTTTGTGATAGCTCCCAAACGGTCTTGTACAAGTC-CTTCATTTCTTGTGG 52651 Query 62282 AAGGTTTG-TA--TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATC 62338 | ||||| || | || ||||| || | | | || || | || || | || Sbjct 52650 GATGTTTGGTAGCTGTTGGATGGACCCGTTGTTTGCAATGATATTGGATTTCATGGCTTC 52591 Query 62339 ATTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATT 62397 || ||| ||| | | || ||| | | | || | || || || | |||| ||| Sbjct 52590 ATCCCA-AATACCCATATCAACCAAATCCTTCAATAGGTATGGATTGACAATTTGGTATT 52532 Query 62398 CTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTAT 62457 | |||||||| ||| | || ||| || || || | ||||| | | ||||| | Sbjct 52531 CACCAGACAAGGTTCTTCTAGAGTACATGTTGGAAGTGAATGGTTCGAAACATTCATTGT 52472 Query 62458 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62517 || |||||||||| ||| || ||||| ||||| || || || || || ||||| | Sbjct 52471 AACCTAAAATTTGAGAAGTGGAAGCAGTTGGCATTGGAGCAACTAACAAGGAGTTTCTTA 52412 Query 62518 GACCGTATGTTCTG--ATTTTATCTTTTAGATGTTCCCAATTCCA-AAGATCCGACGGTA 62574 ||| ||||| | || || | |||| | ||||| | ||| ||| | | || Sbjct 52411 AACC--ATGTTTGGCAATCTTCTTCTTTAATTCATCCCAGTCCCATAAGGTT-GTTGGAG 52355 Query 62575 CAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 62634 |||| ||||||| | ||| | | ||| || ||| |||| | Sbjct 52354 CAACTTTCCAATAGTCGTATTGTAATACACCTTGAGAGGCTGGTGAACCTTCATAAGAGG 52295 Query 62635 CATATGGTCCTTCCTTCTCAGCTAGTT---TACAACTCGCCTCTAATGCACCGTAATAAA 62691 | || || ||||| |||||||| || || || || ||||| ||| ||| ||| | Sbjct 52294 CGTAAGGACCTTCAACCTCAGCTAATTCCGTAGAA---GCTTCTAAAGCAGCGTGATAGA 52238 Query 62692 TGGTTTCAAAGATCTTCTTATTTAGAT-CTTGTGCTT--CCGGGCTATCAAATGGATAAT 62748 | ||||||||||| | | || | | |||| ||| | | | ||||||||| Sbjct 52237 TAGTTTCAAAGATTTGAATGTTCAATTGCTTGGCCTTTTCAGAG---TCAAATGGAACTC 52181 Query 62749 TTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCT 62808 |||| | || || || || ||||| ||||||||||| | | || ||||| |||||| Sbjct 52180 TTAACATCATGAAGGCATCAGCTAAACCTTGAACACCTAGTGCAATTGGTCTGTGTCTCA 52121 Query 62809 TATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 62868 | || || || ||| | || |||||| || || | || |||| ||| | || Sbjct 52120 TGTTGGATCTTCTAGCAGTTTCAACAGGATAGTAGTTTCTGTCAATAACAGCATTCAAAT 52061 Query 62869 TTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA-------------- 62914 | || |||| ||||| || || | || || | || ||| | Sbjct 52060 TCTTGGCAATGACTTTACAAACTTCATGAAGCTTTTGGAAGTCATAAGTTTGAGTTTTTT 52001 Query 62915 --TCGCC--CATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTA 62970 || | || | | ||||| ||| || ||||| |||| ||||| || || Sbjct 52000 GATCCTCAGCAACCTTGACAAAGGCTGGCAAGGCTACAGAGGCCAAGTTACAGACAGCAG 51941 Query 62971 CCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTC 63030 || || |||| | ||||| | || ||| || | ||| |||||||||| | Sbjct 51940 TTTCCTTGTCATCTGAATATTCAACAATTTCACAACATAAGTTAGATGACTTGATAGTAC 51881 Query 63031 CTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTAC 63090 | ||||| | |||||| ||| ||||||| | |||||| |||| ||||||||||||| Sbjct 51880 CCAAATTCTTTTGATTGGATTTTCTGTTACATGAATCCTTGTAAACGATGAATGGAGTAC 51821 Query 63091 CAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATT 63150 |||||||| | |||| ||||| || || | ||| | | ||||||| || | | Sbjct 51820 CAGTTTCAGTTTGAGCTTCTAAGATGGCATACCATAACTTTTGAGCCTTGATGGTCTTTC 51761 Query 63151 TGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACAT 63210 || ||| | ||| ||| ||| | ||| | ||| ||||| || || |||||| Sbjct 51760 TGCCTCTTCCTTCCAATTCATATTGGTCATAAAGCTTTTCAAACTCATCGCCGTAAACAT 51701 Query 63211 TGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTC 63270 ||| | ||| |||| ||| | | || | ||| || | | |||| |||| Sbjct 51700 CACTCAAACCCGGAGCTTCACTAGGAGAGAATAATGTCCAATCAGCATTGGCCTTGACTC 51641 Query 63271 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCT 63330 ||||| || | ||| |||||||||||||| |||| ||||| | |||| ||| | Sbjct 51640 TCTTCATGAACAAATCTGGAATCCAAAGAGCAGGGAATAAGTCTCTGGCTCTAATTTCTT 51581 Query 63331 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 63390 | || || ||||||| | | ||| | ||| | | ||||| || ||||| ||||||| Sbjct 51580 CTTTACCGTGATTCTTTCTGATATCAATGAAGTCAAAGATATCTGAGTGCCAAGGTTCCA 51521 Query 63391 AGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 63450 |||||| || | | || || | ||||| || || || || | ||||| ||||||| Sbjct 51520 AGTATAAAGCAAATGCACCTGGTCTCTTGTTACCACCTTGGTCAACATATCTGGCGGTGT 51461 Query 63451 TATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATAT 63510 | || | ||||| | ||| ||||| | ||| ||||| |||| |||||||| | || | Sbjct 51460 TGTTGAAGACTCTGACCATAGGAATCAAACCATTTGAGGTACCGTTGGTACCAGCAATGT 51401 Query 63511 AGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGA 63570 | ||| ||| | || || || || ||| || || || || ||||||||| Sbjct 51400 AAGAACCAGTGGATCTGATGTTGTGGATGTGTAAACCAATACCACCAGCAGTTTTAGAGA 51341 Query 63571 TTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAA 63630 || || ||| ||||| ||||| ||||| || || ||| ||||| ||||| | Sbjct 51340 TTTGAGCACATTCCTTTAAAGTGTCGTAGATACCATCAATGGAGTCATCCTTCATGGATA 51281 Query 63631 GTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAG 63690 || |||||| ||||||||| | | | ||| || ||||| ||||| |||||||| | Sbjct 51280 CTAAGAAACAGGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAAAGTAGGAGAGG 51221 Query 63691 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATCC 63749 | || || || || ||| ||| | | ||||| || |||||| || || || | Sbjct 51220 CATGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAATAACTTTTTCAATGTTTT 51161 Query 63750 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTG 63809 || | || || || || || || | ||| | || ||| |||||||||||||||||||| Sbjct 51160 CACCG-TGGATACCAACAGCAACTCTCATGATCAAGTGTTGAGGTCTTTCAACAATTTTA 51102 Query 63810 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 63869 ||| || ||||| | || ||| ||||||||||||| |||||||| || ||||| Sbjct 51101 CCGTTGATCTTCAATAGATAAGATCTTTCCAAAGTTTTGAAACCAAAGTAATTGTAGTTG 51042 Query 63870 AAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCC 63929 ||||||| ||| ||||||| | | || || |||| || | ||| |||| | Sbjct 51041 AAGTCTCTATCGAAAATAATGGCGGCATCAAGAGTATCTTTGTGTTTCATAACAGT---- 50986 Query 63930 ATGGTAA----TACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTT 63985 |||||| | |||||| || || || |||||| | || || ||||| Sbjct 50985 TTGGTAAACATCATCTGAAATCATAGGGGACAAAACACCATTTCTTTCGTTGACGTAGTT 50926 Query 63986 GAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATAT 64045 | ||||||| || | |||| | |||||||||||||||| |||||| ||||| || Sbjct 50925 GTATAAATCTTCAACAACTTGAGAGAATAGTTTTTTTGTTTGCTTGTGAAGATTACTGAT 50866 Query 64046 GGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTA 64104 ||| |||||||| || |||| || ||||| ||||| || || || || || Sbjct 50865 GGCAATTCTGGCAGCAAGAACAGCGTAATCAGGATGAACAGTGGT-CATGTAAGCACAAG 50807 Query 64105 TTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAA 64164 |||| || || | |||| ||||| || || || || || | ||| | || ||| | Sbjct 50806 TTTCAGCAGCTAAGTTGTCTAATTCAACGGTAGTAACACCTTCATAGACACCGGTAATGA 50747 Query 64165 CCTTCAT--AGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTT 64222 ||| | || ||||| | ||| || ||||| | | || ||| ||||| || ||| | Sbjct 50746 --TTCTTTGAGTAATTTTGACAGGGTCAATATGCTTAGAGTCTAATCCATAACATAATCT 50689 Query 64223 TCTAATACGAGACGTGATTTTATCAAA 64249 ||| | || |||||||||||||| Sbjct 50688 AGCAATTCTGGAAGTGATTTTATCAAA 50662 >seq165 Length=247000 Score = 291 bits (322), Expect = 1e-73 Identities = 614/901 (68%), Gaps = 20/901 (2%) Strand=Plus/Minus Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337 |||||| || |||||||| ||| || | ||||| || || || || || || | Sbjct 138084 CATAACACCTGCCTTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGC 138025 Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397 | ||||||||||||||||||||||| ||||| || ||||| | || |||| | || Sbjct 138024 TAGGGATATATTTTCCATGAAATCAAATGGATTTGTTACATTAAATATCTTTTCGCAACC 137965 Query 33398 CAATTC-AGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33456 || | | ||| | |||||| || |||||||| | |||| ||||||| ||| || Sbjct 137964 TAAAGCTACTAAT-AGTCTATCAGCAACGAATTCAACATATTGATTCATCAAGTCAGCAT 137906 Query 33457 TCATTCCTATGAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATGGATACC 33515 |||| |||| | | |||||||| || || | ||| | |||| |||||| || Sbjct 137905 TCATACCTAATAATGCAACTGGAATGGCATCAATGAAGTATCTCTT-TTCAATTTCAACT 137847 Query 33516 GCATTTGTTATAATAAATCTAACGGTTTCTTCA-CTCGGTGGATGTAATAAATGTTTAAA 33574 || | || || || | ||| | | | | || | | | | | ||||| || Sbjct 137846 GCTTCTGAAATGATTCTTTCAACAATCTTTGGATCTGGCTTGTTCTTC-AAATGAGAGAA 137788 Query 33575 CATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAA 33634 || |||||| || || || ||| | ||| |||||||| | ||||||||| || || || Sbjct 137787 CAACAAACAAGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAAATTAATTCATTGGAGAA 137728 Query 33635 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGA 33694 || | || ||||| | || ||| || | ||| || |||| ||| || ||||| || Sbjct 137727 TGTCAAACCAGGCATCAAACCTTTCTTCTTCAACCAGAAGATGGCAGCAAAGGATCCTGA 137668 Query 33695 AAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC---T 33751 ||||||| || || || ||||| || |||| ||||| || || | ||| | Sbjct 137667 GAAGAAGACACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCGGCAAACAAGGCATCCTT 137608 Query 33752 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33811 ||| || ||||| | |||||| |||||||| | ||| | ||| || |||||||| Sbjct 137607 GTCTTGGATCCATCTGATAGCCCATTCGGCCTTTTCTTTGATTTCAGGAATGGTTTCTAT 137548 Query 33812 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA--AAGA 33869 |||||| || | | | | ||||| ||| || || | || || || | ||| |||| Sbjct 137547 GGCATTGAATAAAAATTCGTTTTCCTTAGGGTCCTTGATGTATGTGTCCAACAACAAAGA 137488 Query 33870 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 33929 ||| |||| || ||||||||||| || || || || || |||||||| |||| Sbjct 137487 GTATG--TTTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTAGCT 137430 Query 33930 TCGGTAATCTGCACTTCTGTACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCAT 33987 || | ||| || ||||| | |||| ||||| |||| || ||||| || || |||| Sbjct 137429 TCTGGAATTTGAACTTCAGCTGAAAA--GTTCTCAACTAAGTTCTCATTGACAATACCAT 137372 Query 33988 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTC-GTCTGGT--GTTA 34044 || ||| ||||| || || ||||| ||||| || |||| ||| || || Sbjct 137371 CAGAGGCAGCAAAGAAAGCTAATACTCTGGAAATAAAGAATCTTTCATTCTCGTTCATTC 137312 Query 34045 GTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 34104 || ||||| |||| | ||||||||||| ||| | |||||| | |||||||| |||| Sbjct 137311 TGTTGTTCCAGTCATGTAAATCTTTAGATAAATCAATTTCTTCAGCCGTCCAAAAAGATG 137252 Query 34105 CCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATC 34164 | ||||| ||||||| | |||||| ||| | ||| ||||||||| | ||||||| Sbjct 137251 CTTCTGCTCTTTTATAAGCTTCCCAGATTTCAGGGAATTTGATTGGGAATAAGACAAATC 137192 Query 34165 T 34165 | Sbjct 137191 T 137191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629815962474240