Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq165 313 2e-80 >seq165 Length=247000 Score = 313 bits (346), Expect = 2e-80 Identities = 593/860 (69%), Gaps = 21/860 (2%) Strand=Plus/Minus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 ||||| || ||| ||||| |||||||||||||| || ||||| | || ||||||||| Sbjct 138071 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAGGGATATATTT 138012 Query 13641 TCCATAAAATCAAATGGATTTATTGACAT-AAACACTTTATCACAACCTAGTTCTAATAG 13699 ||||| ||||||||||||||| || |||| ||| | || || ||||||| ||| || Sbjct 138011 TCCATGAAATCAAATGGATTTGTT-ACATTAAATATCTTTTCGCAACCTAAAGCTACTAA 137953 Query 13700 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13759 || ||||||||||| || |||| ||||||| ||| || ||| ||||||||||| || Sbjct 137952 TAGTCTATCAGCAACGAATTCAACATATTGATTCATCAAGTCAGCATTCATACCTAATAA 137893 Query 13760 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAAT 13819 | || ||||| || | || || ||||| || || || ||| || || Sbjct 137892 TGCAACTGGAATGGCATCAATGAAGTATCTCTTTTCAATTTCAACTGCTTCTGAAATGAT 137833 Query 13820 AATTGTAATAATCTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGCA 13877 || || ||||| || || | | || | | ||| || | ||||| ||| Sbjct 137832 TCTTTCAACAATCT--TTGGATCTGGCTTGTTCTTCAAATGAGAGAACAACAAACAAGCA 137775 Query 13878 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 13937 || ||| || | || || ||||| | ||| | ||| || || ||||| || || ||| Sbjct 137774 AAGTCAGTGTGTAAACCTTCGTCTCTGCAAATTAATTCATTGGAGAATGTCAAACCAGGC 137715 Query 13938 ATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCC 13997 ||||| ||| || || ||||| || || |||||||| || || || ||||| | ||| Sbjct 137714 ATCAAACCTTTCTTCTTCAACCAGAAGATGGCAGCAAAGGATCCTGAGAAGAAGACACCC 137655 Query 13998 TCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCAT 14057 ||||| ||||| || || | | || ||| ||||| | || | |||| |||||| Sbjct 137654 TCAACAGCAGCGAAAGCAACCAGTCTTTCGGCAAACAAGGCATCCTTGTCTTGGATCCAT 137595 Query 14058 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAA 14117 | |||||||||| | |||| ||| || | || ||||| || ||||| |||||| Sbjct 137594 CTGATAGCCCATTCGGCCTTTTCTTTGATTTCAGGAATGGTTTCTATGGCATTGAATAAA 137535 Query 14118 TATTCCTTCTCTTTAG--TACTTGAAATGTATGTATC-AATAAGTAAGCTATACATTTCA 14174 |||| || || |||| | ||||| ||||||| || || || ||| || |||| Sbjct 137534 AATTCGTTTTCCTTAGGGTCCTTGA--TGTATGTGTCCAACAACAAAGAG-TATGTTTCT 137478 Query 14175 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGT 14234 ||||| ||||||||||| || || |||||||| || || ||||||| | ||| Sbjct 137477 GAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTAGCTTCTGGAATTTGA 137418 Query 14235 ACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAA 14294 ||||| | |||| | || | || || ||||| || ||||||||| || ||||| Sbjct 137417 ACTTCAGCTGAAAAGTTCTCAACTAAGTTCTCATTGACAATACCATCAGAGGCAGCAAAG 137358 Query 14295 AATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT---GTTGAGT---TTTTTCCAA 14348 || || |||| | ||||||| || || |||||| ||| | | || ||||| Sbjct 137357 AAAGCTAATACTCTGGAAATAAAGAAT--CT-TTCATTCTCGTTCATTCTGTTGTTCCAG 137301 Query 14349 TCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTT 14408 || |||||| ||||| | ||| | ||| ||| | ||||||||| || | ||| || Sbjct 137300 TCATGTAAATCTTTAGATAAATCAATTTCTTCAGCCGTCCAAAAAGATGCTTCTGCTCTT 137241 Query 14409 TTATACATTACCCATATTTC 14428 ||||| | |||| ||||| Sbjct 137240 TTATAAGCTTCCCAGATTTC 137221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479726752707200