Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq165 325 4e-84 >seq165 Length=247000 Score = 325 bits (360), Expect = 4e-84 Identities = 596/860 (69%), Gaps = 21/860 (2%) Strand=Plus/Minus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 ||||| || ||| ||||| |||||||| ||||| || ||||| | || ||||||||| Sbjct 138071 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAGGGATATATTT 138012 Query 13429 TCCATAAAATCGAATGGATTTGTTGACAT-AAACACTTTATCACAACCTAGTTCTAATAA 13487 ||||| ||||| |||||||||||| |||| ||| | || || ||||||| ||| ||| Sbjct 138011 TCCATGAAATCAAATGGATTTGTT-ACATTAAATATCTTTTCGCAACCTAAAGCTACTAA 137953 Query 13488 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13547 || ||||||||||| || |||| ||||||| ||| || ||| ||||||||||| || Sbjct 137952 TAGTCTATCAGCAACGAATTCAACATATTGATTCATCAAGTCAGCATTCATACCTAATAA 137893 Query 13548 TTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 13607 | || ||||| || | | || || ||||| || || || || || || Sbjct 137892 TGCAACTGGAATGGCATCAATGAAGTATCTCTTTTCAATTTCAACTGCTTCTGAAATGAT 137833 Query 13608 AATCTTAATAATGTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGCA 13665 | | || ||| | || || | | || | | ||| || | ||||| ||| Sbjct 137832 TCTTTCAACAATCT--TTGGATCTGGCTTGTTCTTCAAATGAGAGAACAACAAACAAGCA 137775 Query 13666 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 13725 || ||| || | || || ||||| | ||| | ||| || || ||||| || || ||| Sbjct 137774 AAGTCAGTGTGTAAACCTTCGTCTCTGCAAATTAATTCATTGGAGAATGTCAAACCAGGC 137715 Query 13726 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 13785 ||||| ||| || || ||||| || || ||||| || ||||| || ||||| | ||| Sbjct 137714 ATCAAACCTTTCTTCTTCAACCAGAAGATGGCAGCAAAGGATCCTGAGAAGAAGACACCC 137655 Query 13786 TCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCAT 13845 ||||| ||||| || || | |||| ||| ||||| | || | |||| | |||||| Sbjct 137654 TCAACAGCAGCGAAAGCAACCAGTCTTTCGGCAAACAAGGCATCCTTGTCTTGGATCCAT 137595 Query 13846 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAA 13905 | |||||||||| | |||| ||| || | || ||||| || |||||||||||| Sbjct 137594 CTGATAGCCCATTCGGCCTTTTCTTTGATTTCAGGAATGGTTTCTATGGCATTGAATAAA 137535 Query 13906 TGTTCCTTCTCTTTA--GTACTTGAAATGTATGTAT-CAATAAGTAAGCTATACATTTCA 13962 ||| || || ||| || |||| |||||||| | ||| || ||| || |||| Sbjct 137534 AATTCGTTTTCCTTAGGGTCCTTG--ATGTATGTGTCCAACAACAAAG-AGTATGTTTCT 137478 Query 13963 GAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT 14022 ||||| |||||||| || || || |||||||| ||||| ||||||||| ||| Sbjct 137477 GAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTAGCTTCTGGAATTTGA 137418 Query 14023 ACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAA 14082 || || | |||| | || | ||||| ||||| |||||||||||| || ||||| Sbjct 137417 ACTTCAGCTGAAAAGTTCTCAACTAAGTTCTCATTGACAATACCATCAGAGGCAGCAAAG 137358 Query 14083 AATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT---GTTGAGT---TTTTTCCAA 14136 || || |||| | ||||||| || || |||||| ||| | | || ||||| Sbjct 137357 AAAGCTAATACTCTGGAAATAAAGAAT--CT-TTCATTCTCGTTCATTCTGTTGTTCCAG 137301 Query 14137 TCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTT 14196 || |||||| ||||| | ||| | ||| ||| | ||||||||| || | ||| || Sbjct 137300 TCATGTAAATCTTTAGATAAATCAATTTCTTCAGCCGTCCAAAAAGATGCTTCTGCTCTT 137241 Query 14197 TTATACATTACCCATATTTC 14216 ||||| | |||| ||||| Sbjct 137240 TTATAAGCTTCCCAGATTTC 137221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478587555669120