Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq83 176 3e-39 seq100 145 6e-30 seq98 120 2e-22 >seq83 Length=232034 Score = 176 bits (194), Expect = 3e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| ||||||||||||||||| || ||||| |||||||| |||||||| || | Sbjct 217419 CCACCTCTTAATCTTAAAACTAAATGGAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAT 217478 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| | ||||||||||| || ||||| | ||||| | |||||| || |||| Sbjct 217479 AAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGATCAGGTGGA 217538 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 ||||||||||| || ||||| ||| ||| || |||| || || ||| || Sbjct 217539 ATTCCTTCTTTATCTTGGATTTTAGACTTAACAGCATCAATGGAGTCACTGGATTCAACT 217598 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||| || ||||||||||| || | |||||| |||||||||||||| Sbjct 217599 TCTAAAGTGATGGTTTTACCGGTTAAAGTTTTAACAAAAATTTGCAT 217645 >seq100 Length=2196 Score = 145 bits (160), Expect = 6e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| ||||| ||||| ||||| | || || || ||||| |||||||| || | Sbjct 1641 CCACCTCTTAATCTCAAAACCAAATGTAATGTTGATTCCTTTTGGATGTTGTAGTCAGAT 1700 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| | ||||||||||| || |||||| | || || | |||||| || ||| Sbjct 1701 AAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGGG 1760 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||||| ||| ||| | || || | ||| | ||| || Sbjct 1761 ATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACC 1820 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 || || |||||||| ||||| || |||||||| || ||||||||||| || Sbjct 1821 TCCAAAGTAATGGTCTTACCAGTTAGAGTTTTAACGAAAATTTGCATTTT 1870 >seq98 Length=99416 Score = 120 bits (132), Expect = 2e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| ||||||| |||||||| | || || || ||||| |||||||| || Sbjct 60773 CCACCTCTTAATCTTAGGACTAAATGCAATGTTGATTCCTTTTGGATGTTGTAGTCAGAC 60714 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| | ||||||||||| || |||| | | || || | |||||| || |||| Sbjct 60713 AAAGTTCTACCATCTTCTAATTGCTTACCAGAGAAGATTAATCTTTGTTGATCAGGTGGA 60654 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| || ||| ||| ||| || ||||| ||| || ||| || Sbjct 60653 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCGATGGTTTCGGTAGATTCGACT 60594 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15355 || || |||||||| ||||| || | || || |||||| Sbjct 60593 TCCAAAGTAATGGTCTTACCGGTTAAGGTCTTGACAAAA 60555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362178281875728