Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016
-11-27] 208 sequences; 9,037,850 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq100 109 5e-19
seq83 105 6e-18
>seq100
Length=2196
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| ||| ||||| |||||||||| ||| ||||| ||||| |||||||| ||
Sbjct 1641 CCACCTCTTAATCTCAAAACCAAATGTAATGTTGATTCCTTTTGGATGTTGTAGTCAGAT 1700
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| |||| || |||||| ||||| || || || | || | || ||||| || ||
Sbjct 1701 AAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGGG 1760
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||||||||| ||||| || || | | | | |||||| || |||
Sbjct 1761 ATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACC 1820
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211
|||| |||||||| || || || | ||||| || ||||||||||||||
Sbjct 1821 TCCAAAGTAATGGTCTTACCAGTTAGAGTTTTAACGAAAATTTGCATTTT 1870
>seq83
Length=232034
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| ||| || || || ||||| || || ||||||||||| |||||||| ||
Sbjct 217419 CCACCTCTTAATCTTAAAACTAAATGGAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAT 217478
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| |||| || |||||| ||||| || || ||| |||| | || |||||||| ||
Sbjct 217479 AAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGATCAGGTGGA 217538
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| |||||||| || ||||| || || ||| || || | | ||| |
Sbjct 217539 ATTCCTTCTTTATCTTGGATTTTAGACTTAACAGCATCAATGGAGTCACTGGATTCAACT 217598
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209
|| | || |||||||| ||||| || ||||| |||||||||||||||
Sbjct 217599 TCTAAAGTGATGGTTTTACCGGTTAAAGTTTTAACAAAAATTTGCATT 217646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419586136346448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |