Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq165 223 3e-53 >seq165 Length=247000 Score = 223 bits (246), Expect = 3e-53 Identities = 548/820 (67%), Gaps = 31/820 (4%) Strand=Plus/Minus Query 12875 ACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAA 12934 ||||| |||||||| ||||| || || || ||| || ||||||||||| ||||| || Sbjct 138056 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAGGGATATATTTTCCATGAAATCAAAT 137997 Query 12935 GGATTTTTCGAACAATAG-TATTTTTTA-CACCCTAATTCTAGTAACAATCTGTCAGCAA 12992 |||||| | ||| || ||| |||| || ||||| ||| ||| | ||| ||||||| Sbjct 137996 GGATTTGTT--ACATTAAATATCTTTTCGCAACCTAAAGCTACTAATAGTCTATCAGCAA 137939 Query 12993 CAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACAGGCATAG 13052 | || || | || || ||||| || ||| ||||| |||| |||| || || || | Sbjct 137938 CGAATTCAACATATTGATTCATCAAGTCAGCATTCATACCTAATAATGCAACTGGAATGG 137879 Query 13053 CTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTTATTACGT 13112 | || | || | | ||||| || ||||||||||| || || |||| || Sbjct 137878 CATCAATGAAGTATCTCTTTTCAATTTCAACTGCTTCTGAAATGAT---TCTTTCAACAA 137822 Query 13113 TCTCTAATGGAG--GATTTGAT----AGATGCTTAAACATCATACATGCAAAATCACAGT 13166 ||| | ||| | ||| | | ||| |||| || ||| ||||| ||| || Sbjct 137821 TCTTT---GGATCTGGCTTGTTCTTCAAATGAGAGAACAACAAACAAGCAAAGTCAGTGT 137765 Query 13167 GCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTC 13226 | || ||||| ||||| | |||| || || || ||||| | ||| ||||| | ||| Sbjct 137764 GTAAACCTTCGTCTCTGCAAATTAATTCATTGGAGAATGTCAAACCAGGCATCAAACCTT 137705 Query 13227 GTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTG 13286 || || | ||| || || |||||||| || || || || || | || ||||| || | Sbjct 137704 TCTTCTTCAACCAGAAGATGGCAGCAAAGGATCCTGAGAAGAAGACACCCTCAACAGCAG 137645 Query 13287 CAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATCCACTTTCTGGCCC 13346 | || || | || ||||| || || || || | ||||| | | |||| Sbjct 137644 CGAAAGCAACCAGTCTTTCGGCAAACAAGGCATCCTTGTCTTGGATCCATCTGATAGCCC 137585 Query 13347 AGTTTGCTTTTTGTTTAACG-CAGTTCATATTTTCTATTGCGTTAAATAAATAAtttttt 13405 | | || |||| ||| | ||| || ||||||| || || |||||| | | ||| Sbjct 137584 ATTCGGCCTTTTCTTTGATTTCAGGA-ATGGTTTCTATGGCATTGAATAAAAATTCGTTT 137526 Query 13406 tCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTT 13465 |||||| ||| || || || || | ||| || || ||||||| ||||| ||| Sbjct 137525 TCCTTAGGGTCCTTGATGTATGTGTCCAACAACAAAGAGTATGTTTCTGAGTGAATGTTT 137466 Query 13466 TCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAA 13525 |||||| |||||||||||||| ||||| |||| |||| | |||||||| | || Sbjct 137465 TCCATCATGATTTGGAAACCATAGAAACACTTAGCTTCTGGAATTTGAACTTCAGCTGAA 137406 Query 13526 AATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTA-- 13583 || | || ||||||| || || || || || ||| |||||||| ||||| | || Sbjct 137405 AAGTTCTCAACTAAGTTCTCATTGACAATACCATCAGAGGCAGCAAAGAAAGCTAATACT 137346 Query 13584 -TGTGCTTAATAAAtttt---ttttCGTT--TTCTGACAACTTTAACCAATCTGGAAAAT 13637 || ||| ||| || || ||||| ||||| || ||| || | |||| Sbjct 137345 CTGGAAATAAAGAATCTTTCATTCTCGTTCATTCTG-----TTGTTCCAGTCATGTAAAT 137291 Query 13638 CTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGC 13677 |||| |||||||| | || ||| | ||||||||||| || Sbjct 137290 CTTTAGATAAATCAATTTCTTCAGCCGTCCAAAAAGATGC 137251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430981307459616