Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq100 170 4e-37 seq165 165 2e-35 seq83 159 8e-34 seq98 145 2e-29 >seq100 Length=2196 Score = 170 bits (188), Expect = 4e-37 Identities = 177/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||||| || | || | ||||||||| ||||| || || || || ||||||||| Sbjct 1641 CCACCTCTTAATCTCAAAACCAAATGTAATGTTGATTCCTTTTGGATGTTGTAGTCAGAT 1700 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | ||||||||| ||||||| ||| || ||||| || |||| || ||||| ||||| || Sbjct 1701 AAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGGG 1760 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || |||||||| || || || || || || ||||| || | | ||| || ||| ||| Sbjct 1761 ATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACC 1820 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGT 104564 || | ||||| ||||||||||| || ||||| || || || |||||||||| Sbjct 1821 TCCAAAGTAATGGTCTTACCAGTTAGAGTTTTAACGAAAATTTGCATTTTGT 1872 >seq165 Length=247000 Score = 165 bits (182), Expect = 2e-35 Identities = 372/549 (68%), Gaps = 10/549 (2%) Strand=Plus/Plus Query 268760 GCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAAT 268819 || ||||||||||| | |||||| | ||| | ||| | || ||| || ||||| || Sbjct 137251 GCATCTTTTTGGACGGCTGAAGAAATTGATTTATCTAAAGATTTACATGACTGGAACAAC 137310 Query 268820 TTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTT-GCGTTTTTTGCAGTTAG 268875 || ||| |||| |||||| ||||| || | | | || || || ||||| | Sbjct 137311 AGAATGAACGAGAATGAAAGATTCTTTATTTCC-AGAGTATTAGCTTTCTTTGCTGCCTC 137369 Query 268876 TGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGA 268935 ||||||||| || || || || |||| ||||| || | || || || ||||| || Sbjct 137370 TGATGGTATTGTCAATGAGAACTTAGTTGAGAACTTTTCAGCTGAAGTTCAAATTCCAGA 137429 Query 268936 AGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAG 268995 ||| | ||||| || || ||||| || || ||||| ||||| ||||| | ||| Sbjct 137430 AGCTAAGTGTTTCTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAAACATACTC 137489 Query 268996 TCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTAT 269055 | | || | || || || || | || || ||||| || |||| | | || Sbjct 137490 TTTGTTGTTGGACACATACATCAAGGACCCTAAGGAAAACGAATTTTTATTCAATGCCAT 137549 Query 269056 GAGAACTATGGACTGTG-TGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGATA 269114 ||| || ||| | | | |||| | ||||||||| | | |||||| | || | Sbjct 137550 AGAAACCATTC-CTGAAATCAAAGAAAAGGCCGAATGGGCTATCAGATGGATCCAAGACA 137608 Query 269115 GCGC-GCCTTAC--GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTT 269171 | ||||| | ||||| | |||||||| || ||||| || ||| | ||||| | Sbjct 137609 AGGATGCCTTGTTTGCCGAAAGACTGGTTGCTTTCGCTGCTGTTGAGGGTGTCTTCTTCT 137668 Query 269172 CGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTT 269231 | || || ||||| || ||||| ||||||||||| | ||| | ||||| || || || | Sbjct 137669 CAGGATCCTTTGCTGCCATCTTCTGGTTGAAGAAGAAAGGTTTGATGCCTGGTTTGACAT 137728 Query 269232 TCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTAT 269291 |||| || ||||| || |||| ||||||||||||||| ||||| |||||||| || | Sbjct 137729 TCTCCAATGAATTAATTTGCAGAGACGAAGGTTTACACACTGACTTTGCTTGTTTGTTGT 137788 Query 269292 TTACTAATT 269300 | || ||| Sbjct 137789 TCTCTCATT 137797 >seq83 Length=232034 Score = 159 bits (176), Expect = 8e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||||| || | |||| ||| | || |||||||| ||||| || ||||||||| Sbjct 217419 CCACCTCTTAATCTTAAAACTAAATGGAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAT 217478 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | ||||||||| ||||||| ||| || ||||||||||| | || ||||||||||| || Sbjct 217479 AAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGATCAGGTGGA 217538 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 |||||||||||||| || || || | || ||| || | || || || | ||| || Sbjct 217539 ATTCCTTCTTTATCTTGGATTTTAGACTTAACAGCATCAATGGAGTCACTGGATTCAACT 217598 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 |||| || || || ||||| || | ||||| ||||| || |||||| || Sbjct 217599 TCTAAAGTGATGGTTTTACCGGTTAAAGTTTTAACAAAAATTTGCATTGTG 217649 >seq98 Length=99416 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||||| || || |||| ||| ||||| ||||| || || || || |||||||| Sbjct 60773 CCACCTCTTAATCTTAGGACTAAATGCAATGTTGATTCCTTTTGGATGTTGTAGTCAGAC 60714 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | ||||||||| ||||||| ||| || |||| || |||| || ||||||||||| || Sbjct 60713 AAAGTTCTACCATCTTCTAATTGCTTACCAGAGAAGATTAATCTTTGTTGATCAGGTGGA 60654 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||| || || || ||||| || || ||| || | ||| ||| ||| ||| || Sbjct 60653 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCGATGGTTTCGGTAGATTCGACT 60594 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 || | ||||| |||||||| || | || || ||||| Sbjct 60593 TCCAAAGTAATGGTCTTACCGGTTAAGGTCTTGACAAA 60556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151395331523264