Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016
-11-27] 208 sequences; 9,037,850 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq83 167 2e-36
seq98 118 9e-22
seq100 116 3e-21
>seq83
Length=232034
Score = 167 bits (184), Expect = 2e-36
Identities = 175/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
||||||||||| ||||| || ||||| ||||||||| ||||||| | ||||| || ||
Sbjct 217648 ACAATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACCATCACTTTAGAAGTTGAATCC 217589
Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||| | || || | | ||| |||||| || |||||||| |||||||||||
Sbjct 217588 AGTGACTCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAAGAAGGAATTCCACCTGAT 217529
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| | | |||||||| || || ||||||||||||| | | ||| | || |||
Sbjct 217528 CAACAAAGATTGATTTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 217469
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| ||||||||||||||||| || |||||||| |||| ||||||| ||
Sbjct 217468 AACATTCAAAAAGAATCCACTCTCCATTTAGTTTTAAGATTAAGAGGTGG 217419
>seq98
Length=99416
Score = 118 bits (130), Expect = 9e-22
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
||||| ||||| || |||||||| |||| || | ||||| || || | || || |||
Sbjct 60556 TTTGTCAAGACCTTAACCGGTAAGACCATTACTTTGGAAGTCGAATCTACCGAAACCATC 60615
Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127
|| | | ||| || ||| ||||| ||||| ||||||||||| ||||| | |
Sbjct 60616 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 60675
Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAA 25187
|| || | || || ||||||||||||| | | ||| || || ||||| || |||||
Sbjct 60676 ATCTTCTCTGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAACATCCAAAAG 60735
Query 25188 GAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||| || | |||||||| ||||| ||||||| ||
Sbjct 60736 GAATCAACATTGCATTTAGTCCTAAGATTAAGAGGTGG 60773
>seq100
Length=2196
Score = 116 bits (128), Expect = 3e-21
Identities = 165/230 (72%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| || || || ||| | || ||||| |||| || | || || || || ||
Sbjct 1868 AATGCAAATTTTCGTTAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCTTC 1809
Query 25058 TGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||| ||||||| || || ||| |||||| ||||||||||| || ||||||||
Sbjct 1808 TGATTCTATCGA--CAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGAG 1751
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| | | || || || || || ||||||||||||| | | ||| | || |||
Sbjct 1750 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 1691
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| || ||||| ||||| || ||||||| || | || ||||||| ||
Sbjct 1690 AACATCCAAAAGGAATCAACATTACATTTGGTTTTGAGATTAAGAGGTGG 1641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433326901513520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |