Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq83 165 7e-36 seq100 123 2e-23 seq98 123 2e-23 seq165 82.4 6e-11 >seq83 Length=232034 Score = 165 bits (182), Expect = 7e-36 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||||||||||||||||||||| ||||| | ||||| ||| ||| Sbjct 217645 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACCATCACTTTAGAAGTTGAATCCAGT 217586 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | | || ||||| ||||| || || || |||||||| |||||| Sbjct 217585 GACTCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAAGAAGGAATTCCACCTGATCAA 217526 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || ||||| || || || ||||| ||| | || | || || |||||| Sbjct 217525 CAAAGATTGATTTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAAC 217466 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTT 22447 ||||||||||||||||| | ||||||||||| |||| | || |||| Sbjct 217465 ATTCAAAAAGAATCCACTCTCCATTTAGTTTTAAGATTAAGAGGTGGTT 217417 >seq100 Length=2196 Score = 123 bits (136), Expect = 2e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||||||||| ||||||||| |||| ||||| || | ||| | || || ||| | Sbjct 1870 AAAATGCAAATTTTCGTTAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCT 1811 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||| | | ||| || | || ||||| |||||||| || ||||| ||||| || Sbjct 1810 TCTGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGAG 1751 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||| | | || || || || || || ||||| ||| | || | || || ||| Sbjct 1750 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 1691 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 ||||| ||||| ||||| || ||||||| |||||| |||| Sbjct 1690 AACATCCAAAAGGAATCAACATTACATTTGGTTTTGAGATT 1650 >seq98 Length=99416 Score = 123 bits (136), Expect = 2e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 |||||| || || ||||||||||| || | ||| | ||||| ||| | ||||| ||| | Sbjct 60555 TTTTGTCAAGACCTTAACCGGTAAGACCATTACTTTGGAAGTCGAATCTACCGAAACCAT 60614 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 |||| | |||| || || ||||||||||| ||||||||||| ||||||||| | | Sbjct 60615 CGACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATT 60674 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || | || || || ||||| ||| | || | || || |||||||| ||||| Sbjct 60675 AATCTTCTCTGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAACATCCAAAA 60734 Query 22407 AGAATCCACCATACATTTAGT 22427 ||||| || | |||||||| Sbjct 60735 GGAATCAACATTGCATTTAGT 60755 >seq165 Length=247000 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 117069 GCTTTCGCCATTGTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATATTTTTTATC 117128 |||||||| ||| || || | ||||| ||||| ||||||||||| || | | Sbjct 137638 GCTTTCGCTGCTGTTGAGGGTGTCTTCTTCTCAGGATCCTTTGCTGCCATCTTCTGGTTG 137697 Query 117129 AAGACCAAAGGTCTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATCGCGTGACGAA 117188 |||| |||||| | ||||| ||| | || || ||| |||||||| | | |||||| Sbjct 137698 AAGAAGAAAGGTTTGATGCCTGGTTTGACATTCTCCAATGAATTAATTTGCAGAGACGAA 137757 Query 117189 GGTTTACACACCGATTTTGCGTG 117211 ||||||||||| || ||||| || Sbjct 137758 GGTTTACACACTGACTTTGCTTG 137780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726935989520