Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016
-11-27] 208 sequences; 9,037,850 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq83 165 7e-36
seq100 123 2e-23
seq98 123 2e-23
seq165 82.4 6e-11
>seq83
Length=232034
Score = 165 bits (182), Expect = 7e-36
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||||||||||||||||||||||||||| ||||| | ||||| ||| |||
Sbjct 217645 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACCATCACTTTAGAAGTTGAATCCAGT 217586
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | | | || ||||| ||||| || || || |||||||| ||||||
Sbjct 217585 GACTCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAAGAAGGAATTCCACCTGATCAA 217526
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || || || ||||| ||| | || | || || ||||||
Sbjct 217525 CAAAGATTGATTTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAAC 217466
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTT 22447
||||||||||||||||| | ||||||||||| |||| | || ||||
Sbjct 217465 ATTCAAAAAGAATCCACTCTCCATTTAGTTTTAAGATTAAGAGGTGGTT 217417
>seq100
Length=2196
Score = 123 bits (136), Expect = 2e-23
Identities = 160/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||||||||| ||||||||| |||| ||||| || | ||| | || || ||| |
Sbjct 1870 AAAATGCAAATTTTCGTTAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCT 1811
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| ||| | | ||| || | || ||||| |||||||| || ||||| ||||| ||
Sbjct 1810 TCTGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGAG 1751
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | | || || || || || || ||||| ||| | || | || || |||
Sbjct 1750 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 1691
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
||||| ||||| ||||| || ||||||| |||||| ||||
Sbjct 1690 AACATCCAAAAGGAATCAACATTACATTTGGTTTTGAGATT 1650
>seq98
Length=99416
Score = 123 bits (136), Expect = 2e-23
Identities = 148/201 (74%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
|||||| || || ||||||||||| || | ||| | ||||| ||| | ||||| ||| |
Sbjct 60555 TTTTGTCAAGACCTTAACCGGTAAGACCATTACTTTGGAAGTCGAATCTACCGAAACCAT 60614
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
|||| | |||| || || ||||||||||| ||||||||||| ||||||||| | |
Sbjct 60615 CGACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATT 60674
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| || | || || || ||||| ||| | || | || || |||||||| |||||
Sbjct 60675 AATCTTCTCTGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAACATCCAAAA 60734
Query 22407 AGAATCCACCATACATTTAGT 22427
||||| || | ||||||||
Sbjct 60735 GGAATCAACATTGCATTTAGT 60755
>seq165
Length=247000
Score = 82.4 bits (90), Expect = 6e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 117069 GCTTTCGCCATTGTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATATTTTTTATC 117128
|||||||| ||| || || | ||||| ||||| ||||||||||| || | |
Sbjct 137638 GCTTTCGCTGCTGTTGAGGGTGTCTTCTTCTCAGGATCCTTTGCTGCCATCTTCTGGTTG 137697
Query 117129 AAGACCAAAGGTCTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATCGCGTGACGAA 117188
|||| |||||| | ||||| ||| | || || ||| |||||||| | | ||||||
Sbjct 137698 AAGAAGAAAGGTTTGATGCCTGGTTTGACATTCTCCAATGAATTAATTTGCAGAGACGAA 137757
Query 117189 GGTTTACACACCGATTTTGCGTG 117211
||||||||||| || ||||| ||
Sbjct 137758 GGTTTACACACTGACTTTGCTTG 137780
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419726935989520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |