Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq98 105 2e-17 seq83 104 6e-17 seq100 98.7 2e-15 seq115 89.7 1e-12 >seq98 Length=99416 Score = 105 bits (116), Expect = 2e-17 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| ||||| | || | || || |||||||||| ||||||||||| |||||| || || Sbjct 60762 TCTTAGGACTAAATGCAATGTTGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 60703 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | ||||| || | |||||| | | || || || || ||| ||||| Sbjct 60702 ATCTTCTAATTGCTTACCAGAGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTT 60643 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||| ||| || | |||| ||| || || | ||| || ||||| || || Sbjct 60642 GTCTTGGATCTTGGCCTTGACAGCGTCGATGGTTTCGGTAGATTCGACTTCCAAAGTAAT 60583 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621 |||||||| || | || || |||||| Sbjct 60582 GGTCTTACCGGTTAAGGTCTTGACAAAA 60555 >seq83 Length=232034 Score = 104 bits (114), Expect = 6e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 |||||||| || || ||||| | ||||||||||| ||||| || |||||||| | ||| Sbjct 217443 TGGAGAGTGGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGC 217502 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || || || || | | || || || || |||||||||| || || || || Sbjct 217503 TTACCAGCAAAAATCAATCTTTGTTGATCAGGTGGAATTCCTTCTTTATCTTGGATTTTA 217562 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| || | || | || ||| | | ||| || || || ||||| || ||||| || Sbjct 217563 GACTTAACAGCATCAATGGAGTCACTGGATTCAACTTCTAAAGTGATGGTTTTACCGGTT 217622 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | |||||| ||||||||||| Sbjct 217623 AAAGTTTTAACAAAAATTTG 217642 >seq100 Length=2196 Score = 98.7 bits (108), Expect = 2e-15 Identities = 144/203 (71%), Gaps = 3/203 (1%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || || |||||||||| ||||||||||| ||||| || |||||||| | ||||| || Sbjct 1671 GTTGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCA 1730 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 |||||||| | | || || || || || |||||| || || || || ||| Sbjct 1731 GCGAAGATTAATCTTTGTTGCTCAGGTGGGATACCTTCTTTGTCTTGGATTTTAGCCTTA 1790 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 || |||| | || | | ||| || ||||| || || |||||||| || |||||| Sbjct 1791 ACATTGTCGATAGAATCAGAAGATTCGACCTCCAAAGTAATGGTCTTACCAGTTAGAGTT 1850 Query 199613 TTCACAAAAATTTGGTACATTTT 199635 || || |||||||| |||||| Sbjct 1851 TTAACGAAAATTTG---CATTTT 1870 >seq115 Length=88618 Score = 89.7 bits (98), Expect = 1e-12 Identities = 161/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 167771 TCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGCCAA 167830 |||||||| |||||||| || ||||| || | |||||| | || ||| | ||| Sbjct 51845 TCCTTGTAAACGATGAATGGAGTACCAGTTTCAGTTTGAGCTTCTAAGATGGCATACCAT 51786 Query 167831 AGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAGAGG 167890 | | ||| || || | ||| |||| |||||||||| ||| ||| ||||| || Sbjct 51785 AACTTTTGAGCCTTGATGGTCTTTCTGCCTCTTCCTTCCAATTCATATTGGTCATAAAGC 51726 Query 167891 TCTTCGAAATCCTTCCCGTAAATTTCG-TCAAGACCGGGAGCTTCCTTCGGACAAAAGAG 167949 | ||| || || | ||||||| || |||| ||| |||||||| | ||| | || | Sbjct 51725 TTTTCAAACTCATCGCCGTAAACATCACTCAA-ACCCGGAGCTTCACTAGGAGAGAATAA 51667 Query 167950 ACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAA 168002 |||||| ||| || || ||| ||||||||||| | || | | |||||| Sbjct 51666 TGTCCAATCAGCATTGGCCTTGACTCTCTTCATGAACAAATCTGGAATCCAAA 51614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178918458173936