Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq100 138 3e-27 seq83 134 3e-26 seq115 100 6e-16 >seq100 Length=2196 Score = 138 bits (152), Expect = 3e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | || | || || || ||||| || ||||| || | | ||| Sbjct 1646 TCTTAATCTCAAAACCAAATGTAATGTTGATTCCTTTTGGATGTTGTAGTCAGATAAAGT 1705 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | |||||||| |||||||| | || |||||| || || || || || Sbjct 1706 TCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGGGATACC 1765 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||||||||| ||||| ||| || || || || | || ||| ||| || || | Sbjct 1766 TTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACCTCCAA 1825 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 |||| ||||| || || | |||||| ||||| | |||||||| Sbjct 1826 AGTAATGGTCTTACCAGTTAGAGTTTTAACGAAAATTTGCATTT 1869 >seq83 Length=232034 Score = 134 bits (148), Expect = 3e-26 Identities = 166/226 (73%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| ||||| | || |||||||| ||||||||||| ||||| || | | ||| Sbjct 217424 TCTTAATCTTAAAACTAAATGGAGAGTGGATTCTTTTTGAATGTTGTAGTCAGATAAAGT 217483 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | |||||||| || || || | || |||||| || || ||||| || Sbjct 217484 TCTACCATCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGATCAGGTGGAATTCC 217543 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 |||||| ||||| ||||| ||| || ||||||| ||| ||| ||| ||||| Sbjct 217544 TTCTTTATCTTGGATTTTAGACTTAACAGCATCAATGGAGTC---ACTGGATTCAACTTC 217600 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 | || | || || || || |||||||| || || | ||||||| Sbjct 217601 TAAAGTGATGGTTTTACCGGTTAAAGTTTTAACAAAAATTTGCATT 217646 >seq115 Length=88618 Score = 100 bits (110), Expect = 6e-16 Identities = 181/262 (69%), Gaps = 2/262 (1%) Strand=Plus/Plus Query 160571 ATGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTG 160630 || ||||||||||| | ||| || | |||| | | ||| | |||||||||||||| Sbjct 51586 ATTAGAGCCAGAGACTTATTCCCTGCTCTTTGGATTCCAGATTTGTTCATGAAGAGAGTC 51645 Query 160631 AAAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGA-TGATGT 160689 || | ||||| ||||||| | |||| ||| | |||||| || || |||| |||||| Sbjct 51646 AAGGCCAATGCTGATTGGACATTATTCTCTCCTAGTGAAGCTCC-GGGTTTGAGTGATGT 51704 Query 160690 TTATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAA 160749 ||| || ||||| || | |||||||| ||| ||| || ||||||| || ||| Sbjct 51705 TTACGGCGATGAGTTTGAAAAGCTTTATGACCAATATGAATTGGAAGGAAGAGGCAGAAA 51764 Query 160750 GGTCGTGAAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTAT 160809 | | | ||||| ||| | | ||| || |||| | | || ||| || |||| Sbjct 51765 GACCATCAAGGCTCAAAAGTTATGGTATGCCATCTTAGAAGCTCAAACTGAAACTGGTAC 51824 Query 160810 GCCCTTTATCGCATACAAGGAT 160831 || || |||| ||||||||| Sbjct 51825 TCCATTCATCGTTTACAAGGAT 51846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109478643231536