Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq75 96.9 5e-15 seq70 87.8 2e-12 >seq75 Length=157796 Score = 96.9 bits (106), Expect = 5e-15 Identities = 145/204 (71%), Gaps = 8/204 (4%) Strand=Plus/Minus Query 126943 AAATTTTTATAGGTCCAACATACTATCATCGTCTTAAACATATGGTTAAAGATAAAATGC 127002 |||| || | ||||| ||||||||||| | | | ||| |||||| | |||||||| | Sbjct 5100 AAATCTTCTTTGGTCCTACATACTATCAAAGATTGAGACACATGGTTGATGATAAAATCC 5041 Query 127003 ATGCTAGAAGTCATGGTCAAGTAACAACATTACATCGTCAACCAAACTGT----GGTCGT 127058 |||| ||| | |||| |||| ||| || | | | ||| |||| ||| | Sbjct 5040 ATGCCAGAGCTAGAGGTCCAGTA-CAAGTTTTGACC---AGACAACCTGTTGAAGGTAGA 4985 Query 127059 TCCCAAGGTGGTGGATTAAGATTTGGAGAAATGGAAAAAGATTGTATTTTGGTTCATGGA 127118 ||| || |||||| |||||||| ||||||||||||| ||||||||| | | ||||| Sbjct 4984 TCCAGAGATGGTGGTTTAAGATTCGGAGAAATGGAAAGAGATTGTATGATCGCCCATGGT 4925 Query 127119 GCCACACAATTTTTAAATGAAAGA 127142 || || ||||| || |||||| Sbjct 4924 GCAGCAGCCTTTTTGAAGGAAAGA 4901 >seq70 Length=104368 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 104920 TGGTGTTAAAGTATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCA 104979 ||||||||| | ||| ||| |||||| || ||| | | |||||| ||| ||||| | Sbjct 63989 TGGTGTTAAGATTTGGGATGGTAATGGCTCTCGTGAATATTTAGACTCTCTAGGATTA-A 63931 Query 104980 CTT-TCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAG 105038 || | || ||||||| ||||| || ||| |||| || || ||||||||||| ||| | Sbjct 63930 CTGATAGAGAAGAAGGCGATTTGGGTCCAGTTTACGGCTTCCAATGGAGACACTTTGGTG 63871 Query 105039 CTCAATATATCGACTGTGATACCGACTATACCGGCCAAGGTATAGACCAA 105088 || | ||| | |||||| | || || || || || | ||| |||||| Sbjct 63870 CTGAGTATGTTGACTGTCACACGGATTACACTGGTAAGGGTTATGACCAA 63821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658401488151680