Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq165 387 2e-102 seq115 352 3e-92 >seq165 Length=247000 Score = 387 bits (428), Expect = 2e-102 Identities = 630/898 (70%), Gaps = 13/898 (1%) Strand=Plus/Minus Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 ||||| || || | ||||| ||||||||||| || || || || ||| |||||| | Sbjct 138071 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAGGGATATATTT 138012 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 ||||| ||||||||||||||| |||||||| |||| |||| | | ||||| ||| || | Sbjct 138011 TCCATGAAATCAAATGGATTTGTTACATTAAATATCTTTTCGCAACCTAAAGCTACTAAT 137952 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 |||||||| || || |||| || |||| ||||||| ||| |||||| |||| |||| Sbjct 137951 AGTCTATCAGCAACGAATTCAACATATTGATTCATCAAGTCAGCATTCATACCTAATAAT 137892 Query 18850 TTAACAGGTAGTGCATCTGT-AAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAAT 18908 ||| || | ||||| | ||| | |||| ||| || | ||||| ||||| || || Sbjct 137891 GCAACTGGAATGGCATCAATGAAGTATCTCTT-TTCAATTTCAACTGCTTCTGAAATGAT 137833 Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968 | |||| | | | || || || | ||| |||| |||||| ||||| Sbjct 137832 TCTTTCAACAATCTTTGGATCTGGCTTGTTCTTCAAATGAGAGAACAACAAACAAGCAAA 137773 Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028 ||| |||| || |||||||| | || |||||||| || ||||| ||||||||||| Sbjct 137772 GTCAGTGTGTAAACCTTCGTCTCTGCAAATTAATTCATTGGAGAATGTCAAACCAGGCAT 137713 Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088 || ||| | || || |||||||| || | |||||| ||||| || ||||| | ||| || Sbjct 137712 CAAACCTTTCTTCTTCAACCAGAAGATGGCAGCAAAGGATCCTGAGAAGAAGACACCCTC 137653 Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTA-GCATCATTATTATGAATCCATT 19147 || || || |||||||| |||||||| || ||| | ||||| || | || |||||| Sbjct 137652 AACAGCAGCGAAAGCAACCAGTCTTTCGGCA-AACAAGGCATCCTTGTCTTGGATCCATC 137594 Query 19148 TCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGAT 19207 | | ||||| || ||||| | ||| | || || || ||||| | ||| ||| | Sbjct 137593 TGATAGCCCATTCGGCCTTTTCTTTGATTTCAGGAATGGTTTCTATGGCATTGAAT--AA 137536 Query 19208 ACATACG--CTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGA 19265 | || || || | | || || | |||| || | ||| ||| ||| ||||||| Sbjct 137535 AAATTCGTTTTCCTTAGGGTCCTTGATGTATGTGTCCAACAACAAAGAGTATGTTTCTGA 137476 Query 19266 ATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTAC 19325 ||||| ||||| || || || || || || ||||| | ||||||| || || || Sbjct 137475 GTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTAGCTTCTGGAATTTGAAC 137416 Query 19326 TTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAA 19385 |||| |||| | || || || || ||||| || || |||||| || ||||| || Sbjct 137415 TTCAGCTGAAAAGTTCTCAACTAAGTTCTCATTGACAATACCATCAGAGGCAGCAAAGAA 137356 Query 19386 TGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAAT----GTATTCCAATCAT 19441 |||||||| |||||| | |||||| | ||| || | ||||| |||| Sbjct 137355 AGCTAATACTCTGGAAATAAAGAATCTTTCAT-TCTCGTTCATTCTGTTGTTCCAGTCAT 137297 Query 19442 TAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTAT 19501 | ||||||||||||||| | ||||||| | ||||||||||| || |||||| |||||| Sbjct 137296 GTAAATCTTTAGATAAATCAATTTCTTCAGCCGTCCAAAAAGATGCTTCTGCTCTTTTAT 137237 Query 19502 ACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTC 19559 | | ||| || ||| | ||| || || |||| |||||||| | |||||||| Sbjct 137236 AAGCTTCCCAGATTTCAGGGAATTTGATTGGGAATAAGACAAATCTTCTCTTATTTTC 137179 >seq115 Length=88618 Score = 352 bits (390), Expect = 3e-92 Identities = 911/1370 (66%), Gaps = 48/1370 (4%) Strand=Plus/Minus Query 47880 GCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCA 47939 |||| ||| || | ||||| ||||| || || || | ||||| | |||||| Sbjct 51968 GCTACAGAGGCCAAGTTACAGACAGCAGTTTCCTTGTCATCTGAATATTCAACAATTTCA 51909 Query 47940 GCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATT--ATTNNNNTTGTTAC 47997 ||||| ||| | ||||||||||||||||| | ||||| ||| |||||| Sbjct 51908 CAACATAAGTTAGATGACTTGATAGTACCCAAATTCTTTTGATTGGATTTTC--TGTTAC 51851 Query 47998 ATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATT 48057 ||| |||||||||| || || || || |||||||| | |||| ||| | ||| | | Sbjct 51850 ATGAATCCTTGTAAACGATGAATGGAGTACCAGTTTCAGTTTGAGCTTCTAAGATGGCAT 51791 Query 48058 TCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTAT 48117 ||| | | |||||| || ||| || | || ||| |||| || Sbjct 51790 ACCATAACTTTTGAGCCTTGATGGTCTTTCTGCCTCTTCCTTCCAATTCATATTGGTCAT 51731 Query 48118 ATAACTTCTCAAATTCATCCCCATACACATTA-TCTAACCCAGGACATTCATTAGGACAC 48176 | | ||| ||||| ||||| || || |||| | || ||||| ||| |||| ||||| | Sbjct 51730 AAAGCTTTTCAAACTCATCGCCGTAAACATCACTCAAACCC-GGAGCTTCACTAGGAGAG 51672 Query 48177 ATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGA 48236 | |||| |||||| ||| || ||||| |||| || | |||||| ||||||||| Sbjct 51671 AATAATGTCCAATCAGCATTGGCCTTGACTCTCTTCATGAACAAATCTGGAATCCAAAGA 51612 Query 48237 GCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGA 48296 || ||||| || || | ||| | |||||| || || |||| || | | |||| Sbjct 51611 GCAGGGAATAAGTCTCTGGCTCTAATTTCTTCTTTACCGTGATTCTTTCTGATATCAATG 51552 Query 48297 AAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTA 48356 ||||| | ||||| | ||||| ||||| || |||| || | | ||||||||| || Sbjct 51551 AAGTCAAAGATATCTGAGTGCCAAGGTTCCAAGTATAAAGCAAATGCACCTGGTCTCTTG 51492 Query 48357 TTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATA 48416 ||||| ||||| || | ||||||||| || ||||| | ||||| | ||| || | | | Sbjct 51491 TTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAGACTCTGACCATAGGAATCAAA 51432 Query 48417 CCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT- 48475 |||||||| |||| ||||| || | ||| ||| ||| | | ||| || || || Sbjct 51431 CCATTTGAGGTACCGTTGGTACCAGCAATGTAAGAACCAGTGGATCTGATGTTGTGGATG 51372 Query 48476 TGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACAC-CGTTTAAGGGTATCAT 48534 || || ||| |||||||| || ||||||| ||| ||||||| | ||||| | | || | Sbjct 51371 TGTAA-ACCAATACCACCAGCAGTTTTAGAGATTTGAGCACATTCCTTTAAAG-TGTCGT 51314 Query 48535 AAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGAT 48594 | || || || || ||||| |||| || || ||||| ||||||||| || Sbjct 51313 AGATACCATCAATGGAGTCATCCTTCATGGATACTAAGAAACAGGAAGACATTTGAGGTC 51254 Query 48595 GACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACA 48654 ||| || | ||| ||||| || ||||| ||||| | || || | | || | || Sbjct 51253 TTGGAGTACCAGCATTGAATAAAGTAGGAGAGGCATGGGTGAAGTATCTTTGAGACATCA 51194 Query 48655 ATTTATATGTTTCAATAACAGAATCTAT-ATCCCATTGATGTATACCTATAGATACACGC 48713 | || || ||||||||||| || || | || | || ||||| | || || | | Sbjct 51193 AGTTGTAAGTTTCAATAACTTTTTCAATGTTTTCACCG-TGGATACCAACAGCAACTCTC 51135 Query 48714 ATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTT 48773 || | || | ||||||||||||||||||||| || || ||||| ||||| ||| || Sbjct 51134 ATGATCAAGTGTTGAGGTCTTTCAACAATTTTACCGTTGATCTTCAATAGATAAGATCTT 51075 Query 48774 TCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAATTGATGAA 48833 ||||| ||||| |||||||| || ||||| ||||| |||| |||||| | | | Sbjct 51074 TCCAAAGTTTTGAAACCAAAGTAATTGTAGTTGAAGTCTCTATCGAAAATAATGGCGGCA 51015 Query 48834 TTTATTCTTTCCTTATGTTT-AT-ATACT-------ACATC------------------C 48866 | | | || || ||||| || | | | ||||| | Sbjct 51014 TCAAGAGTATCTTTGTGTTTCATAACAGTTTGGTAAACATCATCTGAAATCATAGGGGAC 50955 Query 48867 ATTACATTTTTTGATATAATTGA-TTCCTTGTAAAGATCTTCTACAACATCACTAAATAt 48925 | ||| ||| | | |||| | ||||| | |||||| ||||| | | |||| Sbjct 50954 AAAACACCATTT-CTTTCGTTGACGTAGTTGTATAAATCTTCAACAACTTGAGAGAATAG 50896 Query 48926 tttttttGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAGCATAATC 48985 ||||||||||| || ||||||||| || | ||||| ||||| | | ||| ||||| Sbjct 50895 TTTTTTTGTTTGCTTGTGAAGATTACTGATGGCAATTCTGGCAGCAAGAACAGCGTAATC 50836 Query 48986 TGGATGAATTGTTGTACATGT-ACTAGATATTTCTGCTGCTAATATATCTAATTCTTTAG 49044 ||||||| || || ||||| | | | |||| || ||||| | |||||||| | Sbjct 50835 AGGATGAACAGTGGT-CATGTAAGCACAAGTTTCAGCAGCTAAGTTGTCTAATTCAACGG 50777 Query 49045 TAGTTACACCTGTATATATTCCTTGAATAA--CTTTCATTGCTATATTTACTGGATCTAT 49102 |||| |||||| ||| | || ||| | |||| | | || || || || || || Sbjct 50776 TAGTAACACCTTCATAGACACCGGTAATGATTCTTTGA--GTAATTTTGACAGGGTCAAT 50719 Query 49103 ATGATCCATATCCAGTCCATAACATAAtttttttATTCTAGATGTAATTTTATCAAACAT 49162 ||| | || | ||||||||||||| | ||||| || || ||||||||||| Sbjct 50718 ATGCTTAGAGTCTAATCCATAACATAATCTAGCAATTCTGGAAGTGATTTTATCAAATTG 50659 Query 49163 TATATTCTCTTTACGACCGTCACGTTTTATAACAAACATCTTTACTATAA 49212 | | |||| | ||||| | ||| | ||||||||| | || ||||| Sbjct 50658 AACAGGAACTTTTCTCCCGTCTCTTTTAACAACAAACAT-TGTAATATAA 50610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562107338517120