Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq83 116 3e-21 seq100 100 2e-16 >seq83 Length=232034 Score = 116 bits (128), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||| ||||| ||||| ||||||||||| || ||| ||| | | Sbjct 217646 AATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACCATCACTTTAGAAGTTGAATC--C 217589 Query 28613 AGAGACGG--TGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || ||| | | | | | ||| |||||| || ||||| ||| | || ||| Sbjct 217588 AGTGACTCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAAGAAGGAATTCCACCTGAT 217529 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 ||||| ||| | || ||||| || || ||||| |||||| || |||| | | || || Sbjct 217528 CAACAAAGATTGATTTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 217469 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||||||||||||||| ||||| || | || ||||||||| |||| || Sbjct 217468 AACATTCAAAAAGAATCCACTCTCCATTTAGTTTTAAGATTAAGAGGTGG 217419 >seq100 Length=2196 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 ||||||||||| || || ||||| |||| ||||| |||||||| || ||| || Sbjct 1870 AAAATGCAAATTTTCGTTAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCT 1811 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || | | | | || | ||| |||||| |||||||| || | || || Sbjct 1810 TCTGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGAG 1751 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 ||||| ||| | ||||| || || || ||||| |||||| || |||| | | || || Sbjct 1750 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 1691 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||| ||||| ||||| || | || |||| || |||||| |||| || Sbjct 1690 AACATCCAAAAGGAATCAACATTACATTTGGTTTTGAGATTAAGAGGTGG 1641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425403721598832