Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016
-11-27] 208 sequences; 9,037,850 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq83 116 3e-21
seq100 100 2e-16
>seq83
Length=232034
Score = 116 bits (128), Expect = 3e-21
Identities = 165/230 (72%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| ||||| ||||| ||||| ||||||||||| || ||| ||| | |
Sbjct 217646 AATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACCATCACTTTAGAAGTTGAATC--C 217589
Query 28613 AGAGACGG--TGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670
|| ||| | | | | | ||| |||||| || ||||| ||| | || |||
Sbjct 217588 AGTGACTCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAAGAAGGAATTCCACCTGAT 217529
Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730
||||| ||| | || ||||| || || ||||| |||||| || |||| | | || ||
Sbjct 217528 CAACAAAGATTGATTTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 217469
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
||||||||||||||||| ||||| || | || ||||||||| |||| ||
Sbjct 217468 AACATTCAAAAAGAATCCACTCTCCATTTAGTTTTAAGATTAAGAGGTGG 217419
>seq100
Length=2196
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
||||||||||| || || ||||| |||| ||||| |||||||| || ||| ||
Sbjct 1870 AAAATGCAAATTTTCGTTAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCT 1811
Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670
|| || | | | | || | ||| |||||| |||||||| || | || ||
Sbjct 1810 TCTGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGAG 1751
Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730
||||| ||| | ||||| || || || ||||| |||||| || |||| | | || ||
Sbjct 1750 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 1691
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
||||| ||||| ||||| || | || |||| || |||||| |||| ||
Sbjct 1690 AACATCCAAAAGGAATCAACATTACATTTGGTTTTGAGATTAAGAGGTGG 1641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425403721598832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |