Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq115 232 3e-56 >seq115 Length=88618 Score = 232 bits (256), Expect = 3e-56 Identities = 448/653 (69%), Gaps = 15/653 (2%) Strand=Plus/Minus Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951 ||| ||||||| |||||||||||| || ||| ||| ||| || |||||||||||| Sbjct 51677 GGAGAGAATAATGTCCAATCAGCATTGGCCTTGACTCTCTTCATGAACAAATCTGGAATC 51618 Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011 || | ||| ||||| ||||| ||||| ||||||||||| |||||||||||| | | | Sbjct 51617 CAAAGAGCAGGGAATAAGTCTCTGGCTCTAATTTCTTCTTTACCGTGATTCTTTCTGATA 51558 Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071 || | ||| ||||| |||||||||||||| ||||| || || | |||||| |||| | Sbjct 51557 TCAATGAAGTCAAAGATATCTGAGTGCCAAGGTTCCAAGTATAAAGCAAATGCACCTGGT 51498 Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131 || || |||||||| || || ||||| || || | ||||| ||| | | ||| ||| Sbjct 51497 CTCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAGACTCTGACCATAGGA 51438 Query 26132 ACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCG 26191 | || ||| |||| ||||| || | | ||| | || || || ||||| || | | Sbjct 51437 ATCAAACCATTTGAGGTACCGTTGGTACCAGCAATGTAAGAACCAGTGGATCTGATGTTG 51378 Query 26192 TGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAAACTG 26249 || || | ||| || |||||||| ||| || || ||||| || | ||| | Sbjct 51377 TGGATGTGTAAACCAATACCACCAGCAGTTTTAGAGATTTGAGCACATTCCTTTAAA--G 51320 Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309 | ||| | || || | ||| ||| | ||||| || ||| ||||| ||||| | || Sbjct 51319 TGTCGTAGATACCATCAATGGAGTCATCCTTCATGGATACTAAGAAACAGGAAGACATTT 51260 Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTCAC 26369 | | | || || | ||| ||||| || || | ||||| || | |||| || | Sbjct 51259 GAGGTCTTGGAGTACCAGCATTGAATAAAGTAGGAGAGGCATGGGTGAAGTATCTTTGAG 51200 Query 26370 TCA--AAGCTGTATAAGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTCAATAGC 26427 || ||| || |||||||||| ||||| || || || | | | ||| ||| Sbjct 51199 ACATCAAGTTG--TAAGTTTCAATAACTTTTTCAATGTTTTCACCGTGGATACCAACAGC 51142 Query 26428 TGTTCTTAACCACATATATTGAGGTCGTTCAATTACATTATTTTCCG--CATCTCTAATC 26485 ||| | || | |||||||| |||| ||| | ||| ||| |||| ||| Sbjct 51141 AACTCTCATGATCAAGTGTTGAGGTCTTTCA---ACAAT-TTTACCGTTGATCTTCAAT- 51087 Query 26486 AAATAAGATTTTTCTAAAGTTTTCAATCCAAAATAATCATGATTGAAATCTCT 26538 | ||||||| |||| |||||||| || ||||| |||| | ||||| ||||| Sbjct 51086 AGATAAGATCTTTCCAAAGTTTTGAAACCAAAGTAATTGTAGTTGAAGTCTCT 51034 Score = 118 bits (130), Expect = 5e-22 Identities = 124/163 (76%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 25017 ATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCAT 25076 |||| |||||||| |||||| | | ||| |||||||||||||| |||||||||| Sbjct 52534 ATTCACCAGACAAGGTTCTTCTAGAGTACATGTTGGAAGTGAATGGTTCGAAACATTCAT 52475 Query 25077 TATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTTC 25136 | | ||||| ||||||||||| || || ||||||||| || | ||| | || |||| Sbjct 52474 TGTAACCTAAAATTTGAGAAGTGGAAGCAGTTGGCATTGGAGCAACTAACAAGGAGTTTC 52415 Query 25137 TCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179 | ||||||| ||| |||||| | ||||||| |||||| || Sbjct 52414 TTAAACCATGTTTGGCAATCTTCTTCTTTAATTCATCCCAGTC 52372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039358543600