Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq165 208 1e-48 seq83 152 8e-32 seq100 141 1e-28 seq98 86.0 9e-12 >seq165 Length=247000 Score = 208 bits (230), Expect = 1e-48 Identities = 556/838 (66%), Gaps = 16/838 (2%) Strand=Plus/Minus Query 17861 GCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATT 17920 || |||| ||| || ||| | || || ||||| || ||||| || | | ||||| Sbjct 138074 GCCTTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAGGGATATA 138015 Query 17921 AAATTCATAAAATCAAATGGATTAGTGGTTTTATAATAT-TTTTCTTGTATTAATTCGTA 17979 | ||| |||||||||||||| || ||| ||||| ||||| ||| | Sbjct 138014 TTTTCCATGAAATCAAATGGATTTGTTACATTA-AATATCTTTTCGCAACCTAAAGCTAC 137956 Query 17980 TAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAG 18039 ||||| |||||| || || ||||| |||||||| |||||| || ||||||||||| Sbjct 137955 TAATAGTCTATCAGCAACGAATTCAACATATTGATTCATCAAGTCAGCATTCATACCTAA 137896 Query 18040 TAGTCTGAAAGGTAGAGCATCAATAATAAAT-TCTTTCTCTATCTCAACAGACTCTTTTA 18098 || | | || | |||||||| | || ||||| || || ||||| | ||| | Sbjct 137895 TAATGCAACTGGAATGGCATCAATGAAGTATCTCTTT-TCAATTTCAACTG---CTTCTG 137840 Query 18099 TTATGTTTATTACCCTAGATTTTGGCAATTTATTAATTATGTGATTATAATATAATAAAC 18158 ||| || || | | ||||| | || | | || | | | || |||| Sbjct 137839 AAATGATTCTTTCAACAATCTTTGGATCTGGCTTGTTCTTCAAATGAGAGAACAACAAAC 137780 Query 18159 ACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACC 18218 | ||||| ||||||||||||||||| |||||| | |||||||| || || || || | Sbjct 137779 AAGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAAATTAATTCATTGGAGAATGTCAAAC 137720 Query 18219 CGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATA 18278 | ||||| | |||| | || || | ||| || || | || || | || ||||| | Sbjct 137719 CAGGCATCAAACCTTTCTTCTTCAACCAGAAGATGGCAGCAAAGGATCCTGAGAAGAAGA 137660 Query 18279 TACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTCAGT 18337 ||||||||| ||| ||||| || | | |||||| ||||| | | ||| | Sbjct 137659 CACCCTCAACAGCA-GCGAAAGCAACCAGTCTTTCGGCAAACAAGGCATCCTTGTCTTGG 137601 Query 18338 ATCCATTTTTGTGCCCATTCT-CCTTNNNNNNNNATACACGGTATACTCTCTATAGCATT 18396 |||||| | |||||||| |||| | || || || | ||||| ||||| Sbjct 137600 ATCCATCTGATAGCCCATTCGGCCTTTTCTTTGATTTCA-GGAATGGTTTCTATGGCATT 137542 Query 18397 AAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACAT 18456 || ||| || ||||| || | || || || || ||||| | |||||||| || | Sbjct 137541 GAATAAAAATTCGTTTTCCTTAGGGTCCTTGATGTATGTGTCCAACAACAAAGAGTATGT 137482 Query 18457 TTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATA 18516 ||| || || ||| ||||||| || || |||| ||| || | |||| || ||| Sbjct 137481 TTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTAGCTTCTGGAAT 137422 Query 18517 TTGAATCTC-GCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATG 18575 ||||| || ||| ||| | | || || || |||||||| || ||||| |||| | | Sbjct 137421 TTGAACTTCAGCTGAAAAGT-TCTCAACTAAGTTCTCATTGACAATACCATCAGAGGCAG 137363 Query 18576 CGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGA---TTGTTCC 18632 | || || || || || ||| || | ||||||| || || | ||||||| Sbjct 137362 CAAAGAAAGCTAATACTCTGGAAATAAAGAATCTTTCATTCTCGTTCATTCTGTTGTTCC 137303 Query 18633 ATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGC 18690 | |||| || |||||| |||| ||||| |||||| | ||||||||||||| ||| || Sbjct 137302 AGTCATGTAAATCTTTAGATAAATCAATTTCTTCAGCCGTCCAAAAAGATGCTTCTGC 137245 >seq83 Length=232034 Score = 152 bits (168), Expect = 8e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| ||||||| || || || ||||| || || |||||||| ||| Sbjct 217646 AATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACCATCACTTTAGAAGTTGAATCCAG 217587 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| ||| || || |||||| |||||||||||||| || || || || || Sbjct 217586 TGACTCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAAGAAGGAATTCCACCTGATCA 217527 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||||||||||||| ||| |||||||| | |||||| ||||||||||| || || || Sbjct 217526 ACAAAGATTGATTTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAA 217467 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || || |||||||| |||||||||||||| ||| Sbjct 217466 CATTCAAAAAGAATCCACTCTCCATTTAGTTTTAAGATTAAGAGGTGGT 217418 >seq100 Length=2196 Score = 141 bits (156), Expect = 1e-28 Identities = 173/234 (74%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 ||||||||||| || ||||||| | ||||| || || ||||| || || |||||| | Sbjct 1870 AAAATGCAAATTTTCGTTAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCT 1811 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 |||||| ||| || || || |||||| ||||| |||||||| || || || || Sbjct 1810 TCTGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGAG 1751 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 ||||||||||| || | || |||||||| | |||||| ||||||||||| || || Sbjct 1750 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 1691 Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 || || ||||| || | || | ||||| || || ||||||||||| |||| Sbjct 1690 AACAT--CCAAAAGGAATCAACATTACATTTGGTTTTGAGATTAAGAGGTGGTG 1639 >seq98 Length=99416 Score = 86.0 bits (94), Expect = 9e-12 Identities = 109/148 (74%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 155907 AAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAG 155966 || || ||||| || ||||| || || || || ||||||||||| || | | |||||| Sbjct 60631 AAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTAATCTTCTCTGGTAAG 60690 Query 155967 CAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--GAGGCGACGCTTC 156024 || | |||||| |||||||| || || || | | ||||||| || | || | | Sbjct 60691 CAATTAGAAGATGGTAGAACTTTGTCTGACTACA--ACATCCAAAAGGAATCAACATTGC 60748 Query 156025 ATTTAGTGTTAAGATTAAGAGGCGGTGT 156052 ||||||| ||||||||||||| ||||| Sbjct 60749 ATTTAGTCCTAAGATTAAGAGGTGGTGT 60776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731870097132800