Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016
-11-27] 208 sequences; 9,037,850 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq165 208 1e-48
seq83 152 8e-32
seq100 141 1e-28
seq98 86.0 9e-12
>seq165
Length=247000
Score = 208 bits (230), Expect = 1e-48
Identities = 556/838 (66%), Gaps = 16/838 (2%)
Strand=Plus/Minus
Query 17861 GCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATT 17920
|| |||| ||| || ||| | || || ||||| || ||||| || | | |||||
Sbjct 138074 GCCTTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAGGGATATA 138015
Query 17921 AAATTCATAAAATCAAATGGATTAGTGGTTTTATAATAT-TTTTCTTGTATTAATTCGTA 17979
| ||| |||||||||||||| || ||| ||||| ||||| ||| |
Sbjct 138014 TTTTCCATGAAATCAAATGGATTTGTTACATTA-AATATCTTTTCGCAACCTAAAGCTAC 137956
Query 17980 TAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAG 18039
||||| |||||| || || ||||| |||||||| |||||| || |||||||||||
Sbjct 137955 TAATAGTCTATCAGCAACGAATTCAACATATTGATTCATCAAGTCAGCATTCATACCTAA 137896
Query 18040 TAGTCTGAAAGGTAGAGCATCAATAATAAAT-TCTTTCTCTATCTCAACAGACTCTTTTA 18098
|| | | || | |||||||| | || ||||| || || ||||| | ||| |
Sbjct 137895 TAATGCAACTGGAATGGCATCAATGAAGTATCTCTTT-TCAATTTCAACTG---CTTCTG 137840
Query 18099 TTATGTTTATTACCCTAGATTTTGGCAATTTATTAATTATGTGATTATAATATAATAAAC 18158
||| || || | | ||||| | || | | || | | | || ||||
Sbjct 137839 AAATGATTCTTTCAACAATCTTTGGATCTGGCTTGTTCTTCAAATGAGAGAACAACAAAC 137780
Query 18159 ACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACC 18218
| ||||| ||||||||||||||||| |||||| | |||||||| || || || || |
Sbjct 137779 AAGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAAATTAATTCATTGGAGAATGTCAAAC 137720
Query 18219 CGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATA 18278
| ||||| | |||| | || || | ||| || || | || || | || ||||| |
Sbjct 137719 CAGGCATCAAACCTTTCTTCTTCAACCAGAAGATGGCAGCAAAGGATCCTGAGAAGAAGA 137660
Query 18279 TACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTCAGT 18337
||||||||| ||| ||||| || | | |||||| ||||| | | ||| |
Sbjct 137659 CACCCTCAACAGCA-GCGAAAGCAACCAGTCTTTCGGCAAACAAGGCATCCTTGTCTTGG 137601
Query 18338 ATCCATTTTTGTGCCCATTCT-CCTTNNNNNNNNATACACGGTATACTCTCTATAGCATT 18396
|||||| | |||||||| |||| | || || || | ||||| |||||
Sbjct 137600 ATCCATCTGATAGCCCATTCGGCCTTTTCTTTGATTTCA-GGAATGGTTTCTATGGCATT 137542
Query 18397 AAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACAT 18456
|| ||| || ||||| || | || || || || ||||| | |||||||| || |
Sbjct 137541 GAATAAAAATTCGTTTTCCTTAGGGTCCTTGATGTATGTGTCCAACAACAAAGAGTATGT 137482
Query 18457 TTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATA 18516
||| || || ||| ||||||| || || |||| ||| || | |||| || |||
Sbjct 137481 TTCTGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTAGCTTCTGGAAT 137422
Query 18517 TTGAATCTC-GCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATG 18575
||||| || ||| ||| | | || || || |||||||| || ||||| |||| | |
Sbjct 137421 TTGAACTTCAGCTGAAAAGT-TCTCAACTAAGTTCTCATTGACAATACCATCAGAGGCAG 137363
Query 18576 CGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGA---TTGTTCC 18632
| || || || || || ||| || | ||||||| || || | |||||||
Sbjct 137362 CAAAGAAAGCTAATACTCTGGAAATAAAGAATCTTTCATTCTCGTTCATTCTGTTGTTCC 137303
Query 18633 ATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGC 18690
| |||| || |||||| |||| ||||| |||||| | ||||||||||||| ||| ||
Sbjct 137302 AGTCATGTAAATCTTTAGATAAATCAATTTCTTCAGCCGTCCAAAAAGATGCTTCTGC 137245
>seq83
Length=232034
Score = 152 bits (168), Expect = 8e-32
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| ||| ||||||| || || || ||||| || || |||||||| |||
Sbjct 217646 AATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACCATCACTTTAGAAGTTGAATCCAG 217587
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||| ||| || || |||||| |||||||||||||| || || || || ||
Sbjct 217586 TGACTCCATTGATGCTGTTAAGTCTAAAATCCAAGATAAAGAAGGAATTCCACCTGATCA 217527
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||||||||||||| ||| |||||||| | |||||| ||||||||||| || || ||
Sbjct 217526 ACAAAGATTGATTTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAA 217467
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| | || || |||||||| |||||||||||||| |||
Sbjct 217466 CATTCAAAAAGAATCCACTCTCCATTTAGTTTTAAGATTAAGAGGTGGT 217418
>seq100
Length=2196
Score = 141 bits (156), Expect = 1e-28
Identities = 173/234 (74%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
||||||||||| || ||||||| | ||||| || || ||||| || || |||||| |
Sbjct 1870 AAAATGCAAATTTTCGTTAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCT 1811
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|||||| ||| || || || |||||| ||||| |||||||| || || || ||
Sbjct 1810 TCTGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATCCCACCTGAG 1751
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
||||||||||| || | || |||||||| | |||||| ||||||||||| || ||
Sbjct 1750 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 1691
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
|| || ||||| || | || | ||||| || || ||||||||||| ||||
Sbjct 1690 AACAT--CCAAAAGGAATCAACATTACATTTGGTTTTGAGATTAAGAGGTGGTG 1639
>seq98
Length=99416
Score = 86.0 bits (94), Expect = 9e-12
Identities = 109/148 (74%), Gaps = 4/148 (3%)
Strand=Plus/Plus
Query 155907 AAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAG 155966
|| || ||||| || ||||| || || || || ||||||||||| || | | ||||||
Sbjct 60631 AAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTAATCTTCTCTGGTAAG 60690
Query 155967 CAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--GAGGCGACGCTTC 156024
|| | |||||| |||||||| || || || | | ||||||| || | || | |
Sbjct 60691 CAATTAGAAGATGGTAGAACTTTGTCTGACTACA--ACATCCAAAAGGAATCAACATTGC 60748
Query 156025 ATTTAGTGTTAAGATTAAGAGGCGGTGT 156052
||||||| ||||||||||||| |||||
Sbjct 60749 ATTTAGTCCTAAGATTAAGAGGTGGTGT 60776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731870097132800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |