Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016
-11-27] 208 sequences; 9,037,850 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq83 179 7e-40
seq100 178 3e-39
seq165 167 5e-36
seq98 129 1e-24
>seq83
Length=232034
Score = 179 bits (198), Expect = 7e-40
Identities = 177/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | ||| |||||||| | ||| | ||||| || || || |||||
Sbjct 217418 ACCACCTCTTAATCTTAAAACTAAATGGAGAGTGGATTCTTTTTGAATGTTGTAGTCAGA 217477
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||| |||| |||| || ||||| ||||||||||| || ||||| ||||||||||||||
Sbjct 217478 TAAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGATCAGGTGG 217537
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
||||||||||||||||| |||||| || ||| | || || || ||||| ||
Sbjct 217538 AATTCCTTCTTTATCTTGGATTTTAGACTTAACAGCATCAATGGAGTCACTGGATTCAAC 217597
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||||| ||| ||||||||||| ||||| ||||||| ||| || ||||||
Sbjct 217598 TTCTAAAGTGATGGTTTTACCGGTTAAAGTTTTAACAAAAATTTGCATT 217646
>seq100
Length=2196
Score = 178 bits (196), Expect = 3e-39
Identities = 178/231 (77%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || || |||||||| || | || || ||| || || |||||
Sbjct 1640 ACCACCTCTTAATCTCAAAACCAAATGTAATGTTGATTCCTTTTGGATGTTGTAGTCAGA 1699
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||| |||| |||| || ||||| |||||||| ||||||||||| ||||| ||||||||
Sbjct 1700 TAAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGG 1759
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| |||||||| ||||| |||||| || ||||| |||||||| || ||||| ||
Sbjct 1760 GATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGAC 1819
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| | ||||||||| |||||||||| ||||||| || || ||||||||
Sbjct 1820 CTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTAACGAAAATTTGCATTTT 1870
>seq165
Length=247000
Score = 167 bits (184), Expect = 5e-36
Identities = 511/786 (65%), Gaps = 24/786 (3%)
Strand=Plus/Minus
Query 49592 CATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATA-TAATA 49650
||| ||||||||||||||| | |||| ||||| ||| | | | | | || |||||
Sbjct 138009 CATGAAATCAAATGGATTTGTTACATTA-AATATCTTTTCGCAACCTAAAGCTACTAATA 137951
Query 49651 ATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAATT 49710
|||||| || || |||||||||||||| ||| || ||| ||||||||| ||||||
Sbjct 137950 GTCTATCAGCAACGAATTCAACATATTGATTCATCAAGTCAGCATTCATACCTAATAATG 137891
Query 49711 TAAATGGTAATGCATCATCAATAAATTCt---ttttctatttctacagcttgtttaatta 49767
|| ||| |||| ||||||| || | | ||||| ||||| || |||| | ||| |
Sbjct 137890 CAACTGG-AATG--GCATCAATGAAGTATCTCTTTTCAATTTCAACTGCTTCTGAAATGA 137834
Query 49768 tcataattatattattttttga--taatttatatttaatatgattcgcatatattaaACA 49825
| | || | || ||| || | || | || | |||| | | | |||||
Sbjct 137833 T--TCTTTCAACAATCTTTGGATCTGGCTTGTTCTTCAAATGA---GAGAACAACAAACA 137779
Query 49826 TGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 49885
||||| ||||| |||||||| ||||| || | || |||||||| || || || ||
Sbjct 137778 AGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAAATTAATTCATTGGAGAATGTCAAACC 137719
Query 49886 TGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATAT 49945
||||| || ||| |||| || | ||| || || | ||||| | || ||||| |
Sbjct 137718 AGGCATCAAACCTTTCTTCTTCAACCAGAAGATGGCAGCAAAGGATCCTGAGAAGAAGAC 137659
Query 49946 ACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATAT 50005
|||||| ||| || || || | | |||| | |||||| | | ||| ||
Sbjct 137658 ACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCGGCAAACAAGGCATCCTTGTCTTGGAT 137599
Query 50006 CCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAA 50065
||| | |||||||| || || |||| |||||| ||| || ||||||| || || ||
Sbjct 137598 CCATCTGATAGCCCATTCGGCCTTTTCTTTGATTTCAGGAATGGTTTCTATGGCATTGAA 137539
Query 50066 TAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTTC 50125
||| | ||||| | | || ||||| || ||||
Sbjct 137538 TAAAAATTCGTTTTCCTTAGGGTCCTTGATGTATGTGTCCAACAACAAAGAGTATGTTTC 137479
Query 50126 AGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACTG 50185
|| || | |||||| ||||| || ||| || | ||||||| | ||
Sbjct 137478 TGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTAGCTTCTGGAATTTG 137419
Query 50186 AACTT---CGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGC 50242
||||| | |||||| || |||||||| |||||| |||||||||||||| || ||
Sbjct 137418 AACTTCAGCTGAAAAG-TTC--TCAACTAAGTTCTCATTGACAATACCATCAGAGGCAGC 137362
Query 50243 GAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTT---TTAAATTTTCCCA 50299
||||| ||||| || |||||| | ||||||| || | || || | |||
Sbjct 137361 AAAGAAAGCTAATACTCTGGAAATAAAGAATCTTTCATTCTCGTTCATTCTGTTGTTCCA 137302
Query 50300 AGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTT 50359
| | ||| || |||||||| | |||||| |||||||| |||||| | | | |
Sbjct 137301 GTCATGTAAATCTTTAGATAAATCAATTTCTTCAGCCGTCCAAAAAGATGCTTCTGCTCT 137242
Query 50360 TTTATA 50365
||||||
Sbjct 137241 TTTATA 137236
>seq98
Length=99416
Score = 129 bits (142), Expect = 1e-24
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||||| ||||||||| | | || |||||||| || || | || || ||| |
Sbjct 60784 GTTCAATAACACCACCTCTTAATCTTAGGACTAAATGCAATGTTGATTCCTTTTGGATGT 60725
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| || ||||| || |||| |||| || ||||| ||||||| ||||||||||| ||||
Sbjct 60724 TGTAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACCAGAGAAGATTAATCTTTGTT 60665
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
|||||||||| || ||||| || ||||| || || || ||| || | || |
Sbjct 60664 GATCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCGATGGTTTCGG 60605
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527
||||| ||||| | ||||||||| ||||| ||||| || || | |||
Sbjct 60604 TAGATTCGACTTCCAAAGTAATGGTCTTACCGGTTAAGGTCTTGACAAA 60556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984477376360800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |