Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq83 179 7e-40 seq100 178 3e-39 seq165 167 5e-36 seq98 129 1e-24 >seq83 Length=232034 Score = 179 bits (198), Expect = 7e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | ||| |||||||| | ||| | ||||| || || || ||||| Sbjct 217418 ACCACCTCTTAATCTTAAAACTAAATGGAGAGTGGATTCTTTTTGAATGTTGTAGTCAGA 217477 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 ||| |||| |||| || ||||| ||||||||||| || ||||| |||||||||||||| Sbjct 217478 TAAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGATCAGGTGG 217537 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 ||||||||||||||||| |||||| || ||| | || || || ||||| || Sbjct 217538 AATTCCTTCTTTATCTTGGATTTTAGACTTAACAGCATCAATGGAGTCACTGGATTCAAC 217597 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| ||| ||||||||||| ||||| ||||||| ||| || |||||| Sbjct 217598 TTCTAAAGTGATGGTTTTACCGGTTAAAGTTTTAACAAAAATTTGCATT 217646 >seq100 Length=2196 Score = 178 bits (196), Expect = 3e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || |||||||| || | || || ||| || || ||||| Sbjct 1640 ACCACCTCTTAATCTCAAAACCAAATGTAATGTTGATTCCTTTTGGATGTTGTAGTCAGA 1699 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 ||| |||| |||| || ||||| |||||||| ||||||||||| ||||| |||||||| Sbjct 1700 TAAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGCTCAGGTGG 1759 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || |||||||| ||||| |||||| || ||||| |||||||| || ||||| || Sbjct 1760 GATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGAC 1819 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || | ||||||||| |||||||||| ||||||| || || |||||||| Sbjct 1820 CTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTAACGAAAATTTGCATTTT 1870 >seq165 Length=247000 Score = 167 bits (184), Expect = 5e-36 Identities = 511/786 (65%), Gaps = 24/786 (3%) Strand=Plus/Minus Query 49592 CATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATA-TAATA 49650 ||| ||||||||||||||| | |||| ||||| ||| | | | | | || ||||| Sbjct 138009 CATGAAATCAAATGGATTTGTTACATTA-AATATCTTTTCGCAACCTAAAGCTACTAATA 137951 Query 49651 ATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAATT 49710 |||||| || || |||||||||||||| ||| || ||| ||||||||| |||||| Sbjct 137950 GTCTATCAGCAACGAATTCAACATATTGATTCATCAAGTCAGCATTCATACCTAATAATG 137891 Query 49711 TAAATGGTAATGCATCATCAATAAATTCt---ttttctatttctacagcttgtttaatta 49767 || ||| |||| ||||||| || | | ||||| ||||| || |||| | ||| | Sbjct 137890 CAACTGG-AATG--GCATCAATGAAGTATCTCTTTTCAATTTCAACTGCTTCTGAAATGA 137834 Query 49768 tcataattatattattttttga--taatttatatttaatatgattcgcatatattaaACA 49825 | | || | || ||| || | || | || | |||| | | | ||||| Sbjct 137833 T--TCTTTCAACAATCTTTGGATCTGGCTTGTTCTTCAAATGA---GAGAACAACAAACA 137779 Query 49826 TGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 49885 ||||| ||||| |||||||| ||||| || | || |||||||| || || || || Sbjct 137778 AGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAAATTAATTCATTGGAGAATGTCAAACC 137719 Query 49886 TGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATAT 49945 ||||| || ||| |||| || | ||| || || | ||||| | || ||||| | Sbjct 137718 AGGCATCAAACCTTTCTTCTTCAACCAGAAGATGGCAGCAAAGGATCCTGAGAAGAAGAC 137659 Query 49946 ACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATAT 50005 |||||| ||| || || || | | |||| | |||||| | | ||| || Sbjct 137658 ACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCGGCAAACAAGGCATCCTTGTCTTGGAT 137599 Query 50006 CCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAA 50065 ||| | |||||||| || || |||| |||||| ||| || ||||||| || || || Sbjct 137598 CCATCTGATAGCCCATTCGGCCTTTTCTTTGATTTCAGGAATGGTTTCTATGGCATTGAA 137539 Query 50066 TAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTTC 50125 ||| | ||||| | | || ||||| || |||| Sbjct 137538 TAAAAATTCGTTTTCCTTAGGGTCCTTGATGTATGTGTCCAACAACAAAGAGTATGTTTC 137479 Query 50126 AGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACTG 50185 || || | |||||| ||||| || ||| || | ||||||| | || Sbjct 137478 TGAGTGAATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTAGCTTCTGGAATTTG 137419 Query 50186 AACTT---CGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGC 50242 ||||| | |||||| || |||||||| |||||| |||||||||||||| || || Sbjct 137418 AACTTCAGCTGAAAAG-TTC--TCAACTAAGTTCTCATTGACAATACCATCAGAGGCAGC 137362 Query 50243 GAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTT---TTAAATTTTCCCA 50299 ||||| ||||| || |||||| | ||||||| || | || || | ||| Sbjct 137361 AAAGAAAGCTAATACTCTGGAAATAAAGAATCTTTCATTCTCGTTCATTCTGTTGTTCCA 137302 Query 50300 AGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTT 50359 | | ||| || |||||||| | |||||| |||||||| |||||| | | | | Sbjct 137301 GTCATGTAAATCTTTAGATAAATCAATTTCTTCAGCCGTCCAAAAAGATGCTTCTGCTCT 137242 Query 50360 TTTATA 50365 |||||| Sbjct 137241 TTTATA 137236 >seq98 Length=99416 Score = 129 bits (142), Expect = 1e-24 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||||| ||||||||| | | || |||||||| || || | || || ||| | Sbjct 60784 GTTCAATAACACCACCTCTTAATCTTAGGACTAAATGCAATGTTGATTCCTTTTGGATGT 60725 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 | || ||||| || |||| |||| || ||||| ||||||| ||||||||||| |||| Sbjct 60724 TGTAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACCAGAGAAGATTAATCTTTGTT 60665 Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478 |||||||||| || ||||| || ||||| || || || ||| || | || | Sbjct 60664 GATCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCGATGGTTTCGG 60605 Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527 ||||| ||||| | ||||||||| ||||| ||||| || || | ||| Sbjct 60604 TAGATTCGACTTCCAAAGTAATGGTCTTACCGGTTAAGGTCTTGACAAA 60556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984477376360800