Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq165 172 1e-37 seq83 172 1e-37 >seq165 Length=247000 Score = 172 bits (190), Expect = 1e-37 Identities = 370/545 (68%), Gaps = 15/545 (3%) Strand=Plus/Minus Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891 |||||||| ||||| ||| | ||||| || ||||| || || || ||| ||||| Sbjct 138071 TTTTGGTAATCAGATACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAGGGATATATTT 138012 Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATA-TAA 38950 | ||| ||||||||||||||| | |||| ||||| ||| | | | | | || ||| Sbjct 138011 TCCATGAAATCAAATGGATTTGTTACATTA-AATATCTTTTCGCAACCTAAAGCTACTAA 137953 Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010 || |||||| || || |||||||||||||| ||| || ||| ||||||||| ||||| Sbjct 137952 TAGTCTATCAGCAACGAATTCAACATATTGATTCATCAAGTCAGCATTCATACCTAATAA 137893 Query 39011 TTTAAATGGTAATGCATCATCAATAAATTCt---ttttctatttctacagcttgtttaat 39067 | || ||| |||| ||||||| || | | ||||| ||||| || |||| | ||| Sbjct 137892 TGCAACTGG-AATG--GCATCAATGAAGTATCTCTTTTCAATTTCAACTGCTTCTGAAAT 137836 Query 39068 tatcataattatattattttttga--taatttatatttaatatgattcgcatataGTAAA 39125 || | || | || ||| || | || | || | |||| | | | ||| Sbjct 137835 GAT--TCTTTCAACAATCTTTGGATCTGGCTTGTTCTTCAAATGA---GAGAACAACAAA 137781 Query 39126 CATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAAT 39185 || ||||| || || |||||||||||||| || | || |||||||| || || || Sbjct 137780 CAAGCAAAGTCAGTGTGTAAACCTTCGTCTCTGCAAATTAATTCATTGGAGAATGTCAAA 137721 Query 39186 CCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAAT 39245 || ||||| || ||| |||| || | ||| || || | ||||| | || ||||| Sbjct 137720 CCAGGCATCAAACCTTTCTTCTTCAACCAGAAGATGGCAGCAAAGGATCCTGAGAAGAAG 137661 Query 39246 ATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAA 39305 | |||||| ||| || || || | | |||| | |||||| | | ||| Sbjct 137660 ACACCCTCAACAGCAGCGAAAGCAACCAGTCTTTCGGCAAACAAGGCATCCTTGTCTTGG 137601 Query 39306 ATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTA 39365 ||||| | || ||||| || || |||| |||||| ||| || ||||||| || || Sbjct 137600 ATCCATCTGATAGCCCATTCGGCCTTTTCTTTGATTTCAGGAATGGTTTCTATGGCATTG 137541 Query 39366 AATAA 39370 ||||| Sbjct 137540 AATAA 137536 >seq83 Length=232034 Score = 172 bits (190), Expect = 1e-37 Identities = 178/231 (77%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || ||| |||||||| | ||| | ||||| ||| || || || || Sbjct 217418 ACCACCTCTTAATCTTAAAACTAAATGGAGAGTGGATTCTTTTTGAATGTTGTAGTCAGA 217477 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||||| || | || || ||||| |||||||||||||| ||||| ||||| |||||||| Sbjct 217478 TAAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGATCAGGTGG 217537 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTAT--AGTATCTGACGATTCT 172019 ||||||||||||||||| |||||| || ||| | || ||| ||| ||||| Sbjct 217538 AATTCCTTCTTTATCTTGGATTTTAGACTTAACAGCATCAATGGAGTCACTG--GATTCA 217595 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||||| ||| ||||||||||| ||||| ||||||| || || |||||| Sbjct 217596 ACTTCTAAAGTGATGGTTTTACCGGTTAAAGTTTTAACAAAAATTTGCATT 217646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905133646646400