Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq115 232 2e-55 seq49 120 9e-22 seq70 116 1e-20 seq186 100 8e-16 seq27 84.2 6e-11 >seq115 Length=88618 Score = 232 bits (256), Expect = 2e-55 Identities = 600/914 (66%), Gaps = 3/914 (0%) Strand=Plus/Minus Query 155591 AGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAGCA 155650 ||| |||| ||||| || ||||| |||||||| || ||||| ||||| ||||| || Sbjct 51963 AGAGGCCAAGTTACAGACAGCAGTTTCCTTGTCATCTGAATATTCAACAATTTCACAACA 51904 Query 155651 CAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATC 155710 | |||||| |||||| || || |||||||| || || ||||| |||||||| | ||| Sbjct 51903 TAAGTTAGATGACTTGATAGTACCCAAATTCTTTTGATTGGATTTTCTGTTACATGAATC 51844 Query 155711 CTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAG 155770 |||||| | ||| |||| || || || || | || || || | || ||| | Sbjct 51843 CTTGTAAACGATGAATGGAGTACCAGTTTCAGTTTGAGCTTCTAAGATGGCATACCATAA 51784 Query 155771 GTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAGCGT 155830 | | || || || ||| || ||| |||||| | ||||||| ||| ||| | Sbjct 51783 CTTTTGAGCCTTGATGGTCTTTCTGCCTCTTCCTTCCAATTCATATTGGTCATAAAGCTT 51724 Query 155831 TCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAGCGA 155890 | | || || |||||| |||||||| || || | | || | || | | Sbjct 51723 TTCAAACTCATCGCCGTAAACATCACTCAAACCCGGAGCTTCACTAGGAGAGAATAATGT 51664 Query 155891 CCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAA 155950 |||| ||| | | || | || ||| || | ||| ||||| |||| ||| Sbjct 51663 CCAATCAGCATTGGCCTTGACTCTCTTCATGAACAAATCTGGAATCCAAAGAGCAGGGAA 51604 Query 155951 AAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTC 156010 | ||| || || | || || | ||||||||||| | | || | ||| || Sbjct 51603 TAAGTCTCTGGCTCTAATTTCTTCTTTACCGTGATTCTTTCTGATATCAATGAAGTCAAA 51544 Query 156011 AATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACC 156067 ||||| | || || |||| || | |||||| ||| |||||| ||||| Sbjct 51543 GATATCTGAGTGCCAAGGTTCCAAGTATAAAGCAAATGCACCTGGTCTCTTGTTACCACC 51484 Query 156068 CTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGA 156127 || || ||||| | || || || |||||||| | | ||||||||| | |||||| || Sbjct 51483 TTGGTCAACATATCTGGCGGTGTTGTTGAAGACTCTGACCATAGGAATCAAACCATTTGA 51424 Query 156128 AGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCC 156187 || || ||||| || ||| | ||||||| || | | || || || |||| || Sbjct 51423 GGTACCGTTGGTACCAGCAATGTAAGAACCAGTGGATCTGATGTTGTGGATGTGTAAACC 51364 Query 156188 AATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTC 156247 ||||||||| | |||||| |||||||| |||||||||| ||| | | | ||||| || Sbjct 51363 AATACCACCAGCAGTTTTAGAGATTTGAGCACATTCCTTTAAAGTGTCGTAGATACCATC 51304 Query 156248 AATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCC 156307 ||| || ||||| | ||| |||| || | || ||| | |||||||| ||| || || Sbjct 51303 AATGGAGTCATCCTTCATGGATACTAAGAAACAGGAAGACATTTGAGGTCTTGGAGTACC 51244 Query 156308 AGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGT 156367 ||| ||||||| ||||| | ||||| | || || | | |||||| | | ||| || Sbjct 51243 AGCATTGAATAAAGTAGGAGAGGCATGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGT 51184 Query 156368 CTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATG 156427 || ||| || |||| || ||||| |||| | || || ||||| || || Sbjct 51183 TTCAATAACTTTTTCAATGTTTTCACCGTGGATACCAACAGCAACTCTCATGATCAAGTG 51124 Query 156428 CTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTT 156487 ||||| | || ||||| || | || || || || | | ||||| |||||| Sbjct 51123 TTGAGGTCTTTCAACAATTTTACCGTTGATCTTCAATAGATAAGATCTTTCCAAAGTTTT 51064 Query 156488 AAACCCGAAATAAT 156501 || || || |||| Sbjct 51063 GAAACCAAAGTAAT 51050 >seq49 Length=60856 Score = 120 bits (132), Expect = 9e-22 Identities = 329/497 (66%), Gaps = 18/497 (4%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| ||||| | | || || || || |||| |||||||||||| || || Sbjct 30019 CTATCAAATCTACCTGGTCTTGTCAAGGCCTTATCCAATAAATCGGCTCTGTTGGTACCT 29960 Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969 || |||||||||| | || | ||| || ||||||| || ||||| || Sbjct 29959 GCTAATACAACAACATGGTCATCTGACTTGAAACCATCCAGTTCAACCAATATTTGGTTC 29900 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttA 289029 || || ||| ||||||||||| ||| || ||| | | | || ||| Sbjct 29899 AGGGTGGCTTCTCTTTCATCATTCCCACCACTAGAACCTC-----TAGC-------CTTA 29852 Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 |||| ||||| ||||| ||||||||||| | || || | ||| | ||| || | | Sbjct 29851 CCAATGGCATCTATTTCATCAATGAAAATTATACTTGGTGCATTCTTTCTTGCTGTGGTG 29792 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 |||| |||||| || | || || || | ||| ||| ||||||| |||||||||| | | Sbjct 29791 AATAGTTCTCTAACCCTTGAAGCACCCATACCTACAAACATTTCCACAAATTCAGCACCT 29732 Query 289150 GATACTTGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 || || |||| |||| ||| ||| || || || ||| | || || || ||||| Sbjct 29731 GAAAC-AGAATAAAATGGAACACCTGCCTCACCAGCCGTGGCCTTAGCTAGCAGAGTCTT 29673 Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGCAGACT 289267 ||| || || || || || |||| | | || | || | | |||| ||||| || Sbjct 29672 ACCAGTACCTGGAGGACCAGACAATATAGCACCTCTAGGCAATCTTGCTCCCAG-TTTCT 29614 Query 289268 TATATTTCTCAGG-GCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326 ||| || | || ||| | || || | |||| |||| || ||| | || || ||| Sbjct 29613 CATACTTGGCTGGTTCTC-TCAAGAAATGAACAAATTCCATAATTTCCTGCTTAGCTTCA 29555 Query 289327 TCACATCCTGCTACATC 289343 ||||| || || ||||| Sbjct 29554 TCACAACCAGCAACATC 29538 >seq70 Length=104368 Score = 116 bits (128), Expect = 1e-20 Identities = 244/356 (69%), Gaps = 16/356 (4%) Strand=Plus/Minus Query 380907 AGAACTACTATGGTTTATTAAGGGTGATACATCAAACAGAAGGCTA--AAGGCACAGAAT 380964 |||| | || ||||| |||||||||||||| |||| || ||| || | | | | Sbjct 64043 AGAATTGCTTTGGTTCATTAAGGGTGATACCAACAACAAAACTCTACAAAAGGATGG--T 63986 Query 380965 GTAAAAATCTGGAATGGTAATGGTAGTCGTGAGTTTTTAGATTCCCGTGGTCTAACCAAT 381024 || || || ||| |||||||||| |||||| | |||||| || | || |||| || Sbjct 63985 GTTAAGATTTGGGATGGTAATGGCTCTCGTGAATATTTAGACTCTCTAGGATTAACTGAT 63926 Query 381025 AACGAAGAAGATGACCTTGGTCCTATTTACGGATTTCAGTGGAGACATTTTAACGCCGAT 381084 | ||||||| || | ||||| ||||||| || || |||||||| ||| || || Sbjct 63925 AGAGAAGAAGGCGATTTGGGTCCAGTTTACGGCTTCCAATGGAGACACTTTGGTGCTGAG 63866 Query 381085 TATGATAATTGTGATAGTGATTATACTGGTAAGGGTGTCGACCAGTTAAAATATATCATA 381144 |||| | | ||| | | ||||| |||||||||||| ||||| | | | ||||| Sbjct 63865 TATGTTGACTGTCACACGGATTACACTGGTAAGGGTTATGACCAACTGAGCGAGATCATC 63806 Query 381145 GACCAGCTAAAAAATCCTGAAACAAGAAATTCAC-GCCGACTAATTATGACTGCGTGGAA 381203 | ||||||| | || || | | | | || | || | || ||| |||| ||||| Sbjct 63805 CATAAGCTAAAGA--CC--AACCCATA---TGACAGAAGAATCATCATGTCTGCTTGGAA 63753 Query 381204 TCCTTGCCAGA--TTAATGATATGGCTTTACCACCTTGCCATATTTTATGCCAGTT 381257 ||| ||||| | || | |||||| |||| || || ||| | || |||||||| Sbjct 63752 CCCT--CCAGACTTCAAGAAAATGGCTCTACCCCCATGTCATGTGTTCTGCCAGTT 63699 >seq186 Length=158047 Score = 100 bits (110), Expect = 8e-16 Identities = 116/156 (74%), Gaps = 3/156 (2%) Strand=Plus/Minus Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871 || |||||||| | | |||||||| || || || ||| || ||||||||||| Sbjct 93964 CAAAATTTCTTTTAATCTAGGAACACCTGAAGTAACCTT---CTTAGAAGCAACACCAGC 93908 Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931 ||| ||||||||||||| ||| | ||| |||| || |||||||| |||||| || | Sbjct 93907 AAAATGGAAAGTATTCAAAGTCATTTGTGTAGCAGGTTCACCAATGGATTGTGCAGCTAA 93848 Query 301932 CATACCAACCATTTCTCCTGGTGCTACAATAGACTT 301967 | |||||||||||| ||||| || |||||||| Sbjct 93847 AACACCAACCATTTCACCTGGATGAACGATAGACTT 93812 >seq27 Length=43778 Score = 84.2 bits (92), Expect = 6e-11 Identities = 155/223 (70%), Gaps = 6/223 (3%) Strand=Plus/Minus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTG--TCTCGCAATT 289086 ||||| |||||||| ||| |||| ||||| | ||| | ||||| ||| || ||| Sbjct 14522 ACCAATAGCATCAACTTCATCAAAAAAAATAATACATGCTT--TTTTGGTTCTTGCCATT 14465 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 |||| ||||| || || || || ||||||||| ||| |||| |||||| Sbjct 14464 TCAAACAATTCCCTAACCATTCTAGCACCTTCACCAACATATTTTTGAACAAGCTCAGAA 14405 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGC-CAGAAGTGT 289205 | ||| ||||||||| ||| | | | ||| ||||| || || || || ||| Sbjct 14404 CCAATGACTCTAATGAATGTGGCATCAGTTCTGTTTGCAACTGCTCTAGCACACAA-TGT 14346 Query 289206 CTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGT 289248 |||||| || ||||||||||| | |||| || ||||||||| Sbjct 14345 CTTACCAGTACCAGGTGGTCCATACAATAAAATACCCTTTGGT 14303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471813677606096