Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq115 219 1e-51 seq165 134 3e-26 seq186 120 7e-22 seq114 102 2e-16 >seq115 Length=88618 Score = 219 bits (242), Expect = 1e-51 Identities = 575/868 (66%), Gaps = 21/868 (2%) Strand=Plus/Plus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 || ||||||||||||||| | ||| | ||||| || | |||| || | || || Sbjct 51052 TACTTTGGTTTCAAAACTTTGGAAAGATCTTATCTATTGAAGATCAACGGTAAAATTGTT 51111 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 ||| | ||||||||| || | | | ||||| ||||||| || || | | ||| || Sbjct 51112 GAAAGACCTCAACACTTGATCATGAGAGTTGCTGTTGGTATCCACGGTGAAAACATTGAA 51171 Query 110424 GCTGTTATTGAATGTTA-----TGATGTATTAAGTAAAAAGAAAGCT-ATTCATGCTACT 110477 ||||||||| ||| |||||| | || ||| | | | ||||| || Sbjct 51172 AAAGTTATTGAAACTTACAACTTGATGTCTCAA------AGATACTTCACCCATGCCTCT 51225 Query 110478 CCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGG 110536 ||||| |||| || || || ||| || ||| || |||| || |||||| || Sbjct 51226 CCTACTTTATTCAATGCTGGTACTCCAAGACCTCAAATGTCTTCCTG-TTTCTTAGTATC 51284 Query 110537 AATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTC 110596 || || ||||| || ||||| ||||| || || || | || ||| ||||| || || Sbjct 51285 CATGAAGGATGACTCCATTGATGGTATCTACGACACTTTAAAGGAATGTGCTCAAATCTC 51344 Query 110597 TAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATAT 110656 ||||| |||| || |||||| | ||| | || | || | || | || | | || Sbjct 51345 TAAAACTGCTGGTGGTATTGGTTTACACATCCACAACATCAGATCCACTGGTTCTTACAT 51404 Query 110657 CGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACAC 110716 || | || ||| | |||| ||| | |||| ||| | |||||||||||| |||| Sbjct 51405 TGCTGGTACCAACGGTACCTCAAATGGTTTGATTCCTATGGTCAGAGTCTTCAACAACAC 51464 Query 110717 TGCAAAATATGTGAATCAAGGTGGTAA---GAGAAATGGCTCATTTGCTATCTATCTCGA 110773 || | |||||| | ||||||||||| |||| || |||||||| | || | || Sbjct 51465 CGCCAGATATGTTGACCAAGGTGGTAACAAGAGACCAGGTGCATTTGCTTTATACTTGGA 51524 Query 110774 ACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGA 110833 ||||||||| |||||||| ||||| ||| | || | | || ||||| || ||||| Sbjct 51525 ACCTTGGCACTCAGATATCTTTGACTTCATTGATATCAGAAAGAATCACGGTAAAGAAGA 51584 Query 110834 ACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGT 110893 | ||||| | || ||||| ||| | |||||| ||||||| |||||||| | || Sbjct 51585 AATTAGAGCCAGAGACTTATTCCCTGCTCTTTGGATTCCAGATTTGTTCATGAAGAGAGT 51644 Query 110894 TCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGT 110953 | | |||| ||| | | | | |||| | |||| ||| | |||||| Sbjct 51645 CAAGGCCAATGCTGATTGGACATTATTCTCTCCTAGTGAAGCTCCGGGTTTGAGTGATGT 51704 Query 110954 ATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAA 111013 || || | ||||||||| | ||||| || |||||||| ||||| ||| | || Sbjct 51705 TTACGGCGATGAGTTTGAAAAGCTTTATGACCAATATGAATTGGAAGG-AAGAGGCAGAA 51763 Query 111014 ACAAATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAA 111072 | | || | |||||| | | |||| ||| | ||| | ||| ||||||||| | Sbjct 51764 AGACCATCAAGGCTCAAAAGTTATGGTATGCCATCTTAGAAGCTCAAACTGAAACTGGTA 51823 Query 111073 CTCCTTATATTTTGTATAAAGA-TCATATTAATCGCAAATCTAATCAAATGAATTTAGGA 111131 |||| | || | || || || |||| ||| | ||||| ||||||| |||||| || Sbjct 51824 CTCCATTCATCGTTTACAAGGATTCAT-GTAACAGAAAATCCAATCAAAAGAATTTGGGT 51882 Query 111132 ACAATTAAGTCTAGTAATTTGTGCTGTG 111159 || || ||||| ||| || || |||| Sbjct 51883 ACTATCAAGTCATCTAACTTATGTTGTG 51910 >seq165 Length=247000 Score = 134 bits (148), Expect = 3e-26 Identities = 275/399 (69%), Gaps = 20/399 (5%) Strand=Plus/Plus Query 131787 TTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGAT---GATTCCG 131843 |||||| ||| ||| | || || ||||||||||| | |||||| ||||| ||| || Sbjct 137558 TTCCTGAAATCAAAGAAAAGGCCGAATGGGCTATCAGATGGATCCAAGACAAGGATGCC- 137616 Query 131844 CTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTG 131903 | ||| | | |||||| || ||||| ||| |||||| ||| | ||||| ||||| Sbjct 137617 -TTGTTTGCCGA-AAGACTGGTTGCTTTCGCTGCTGTTGAGGGTGTCTTCTTCTCAGGAT 137674 Query 131904 CTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCA 131963 | || ||| ||||| ||| | |||||| || ||||||||||| | |||| |||| Sbjct 137675 CCTTTGCTGCCATCTTCTGGTTGAAGAAGAAAGGTTTGATGCCTGGTTTGACATTCTCCA 137734 Query 131964 ATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC---TATATTAATCTATA 132020 || |||| || | ||||| |||| || || ||||| ||||| | | || ||| | Sbjct 137735 ATGAATTAATTTGCAGAGACGAAGGTTTACACACTGACTTTGCTTGTTTGTTGTTCTCT- 137793 Query 132021 GAAAATTTGCTG-ATAAACTTGATGAAAATAATATTAAACAACTTATAAGCGAAGCAGTT 132079 ||||| | | || | ||| ||| | | || || | | || ||||||||| Sbjct 137794 ---CATTTGAAGAACAAGCCAGATCCAAAGATTGTTGAAAGAATCATTTCAGAAGCAGTT 137850 Query 132080 GATATCGAGAAGGAGTTTATT-ACAGAAGCTTTGCC--TTGCAATTTGATTGGGATGAAT 132136 || || || || ||| | || | || || | || ||||| || | || |||||| Sbjct 137851 GAAATTGA-AAAGAGATACTTCATTGATGCCATTCCAGTTGCA--TTATTAGGTATGAAT 137907 Query 132137 GCTGACTCTATGAAGGAGTACATTGAATTCGTTGCTGAT 132175 ||||||| ||||| | || ||||||||||||||||| Sbjct 137908 GCTGACTTGATGAATCAATATGTTGAATTCGTTGCTGAT 137946 >seq186 Length=158047 Score = 120 bits (132), Expect = 7e-22 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389 ||||| || ||||| ||||| ||| | ||||||||||| |||||||| |||| ||||||| Sbjct 91973 GTTCTTTTTAATAGACAACCTTCATTACATAAAATGTCCATGATGGCACATAGAGTCAAA 92032 Query 305390 GTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGAT 305449 || | || | |||||| ||||||| || | | | | ||||||||||| ||| Sbjct 92033 GTCATGCCTTATTCTACATTTAGATTAAACTTATCCGTTACTTCTCCTTATAATGCAGAT 92092 Query 305450 TTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485 |||||||| ||||| |||||| | ||||| || ||| Sbjct 92093 TTTGATGGTGATGAGATGAATCTACATGTTCCACAA 92128 >seq114 Length=91417 Score = 102 bits (112), Expect = 2e-16 Identities = 120/160 (75%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389 ||||||||||| || |||||||| | |||| | | || || || |||| | | |||| Sbjct 28792 GTTCTGTTCAACAGACAACCATCTTTACATAGATTATCCATCTTGTCTCACTATG-CAAA 28850 Query 305390 G-TATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGA 305448 | | | || | |||||| |||| |||| | ||| |||||| ||||| ||||| || Sbjct 28851 GATCAGACCTTGGAGAACATTTAGATTGAATGAATGTGTTTGTACACCTTACAATGCCGA 28910 Query 305449 TTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCA 305488 ||||||||| ||||||||||| | ||||| |||||| || Sbjct 28911 TTTTGATGGTGATGAAATGAACTTACATGTTCCTCAAACA 28950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186809637143888