Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq83 96.9 8e-15 seq98 95.1 3e-14 seq115 89.7 1e-12 >seq83 Length=232034 Score = 96.9 bits (106), Expect = 8e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| |||||||| ||||| ||| |||| | | || | Sbjct 217630 AAAACTTTAACCGGTAAAACCATCACTTTAGAAGTTGAATCCAGTGACTCCATTGATGCT 217571 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || || ||||| |||||||||||| || || |||||| | || || Sbjct 217570 GTTAAGTCTAAAATCCAAGATAAAGAAGGAATTCCACCTGATCAACAAAGATTGATTTTT 217511 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| || |||||||| || ||||| | || |||||| | || ||||| || Sbjct 217510 GCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAACATTCAAAAAGAATCC 217451 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 ||||| || | ||||| ||| Sbjct 217450 ACTCTCCATTTAGTTTTAAGA 217430 >seq98 Length=99416 Score = 95.1 bits (104), Expect = 3e-14 Identities = 135/189 (71%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | || || || || || ||||||||||| ||| | | || || | Sbjct 60555 TTTTGTCAAGACCTTAACCGGTAAGACCATTACTTTGGAAGTCGAATCTACCGAAACCAT 60614 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 ||| | || ||| ||||| ||||| || ||||| ||| || || |||||| | Sbjct 60615 CGACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATT 60674 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 |||||| | || ||||| || |||||||| || |||||| | || |||||| |||| || Sbjct 60675 AATCTTCTCTGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAACATCCAAAA 60734 Query 206358 AGAGTCTAC 206366 || || || Sbjct 60735 GGAATCAAC 60743 >seq115 Length=88618 Score = 89.7 bits (98), Expect = 1e-12 Identities = 161/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 173110 TCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGCCAA 173169 |||||||| |||||||| || ||||| || | |||||| | || ||| | ||| Sbjct 51845 TCCTTGTAAACGATGAATGGAGTACCAGTTTCAGTTTGAGCTTCTAAGATGGCATACCAT 51786 Query 173170 AGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAGAGG 173229 | | ||| || || | ||| |||| |||||||||| ||| ||| ||||| || Sbjct 51785 AACTTTTGAGCCTTGATGGTCTTTCTGCCTCTTCCTTCCAATTCATATTGGTCATAAAGC 51726 Query 173230 TCTTCGAAATCCTTCCCGTAAATTTCG-TCAAGACCGGGAGCTTCCTTCGGACAAAAGAG 173288 | ||| || || | ||||||| || |||| ||| |||||||| | ||| | || | Sbjct 51725 TTTTCAAACTCATCGCCGTAAACATCACTCAA-ACCCGGAGCTTCACTAGGAGAGAATAA 51667 Query 173289 ACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAA 173341 |||||| ||| || || ||| ||||||||||| | || | | |||||| Sbjct 51666 TGTCCAATCAGCATTGGCCTTGACTCTCTTCATGAACAAATCTGGAATCCAAA 51614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181817650447568