Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20guilliermondii_20[genbank_20GCA_5F900119595.1_202016 -11-27] 208 sequences; 9,037,850 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq165 237 1e-57 seq125 111 1e-19 seq75 91.5 1e-13 >seq165 Length=247000 Score = 237 bits (262), Expect = 1e-57 Identities = 586/871 (67%), Gaps = 25/871 (3%) Strand=Plus/Plus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 || |||||| | || ||||| ||| | ||| || ||| || || |||| |||| | Sbjct 137191 AGATTTGTCTTATTCCCAATCAAATTCCCTGAAATCTGGGAAGCTTATAAAAGAGCAGAA 137250 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCA 43816 || || |||||||| || |||||| ||||||| ||||||| ||| | |||| || Sbjct 137251 GCATCTTTTTGGACGGCTGAAGAAATTGATTTATCTAAAGATTTACATGACTGGAA--CA 137308 Query 43817 TTAAAACCA-CAAGAA--AAACATT--TTATATCTTTGGTTTTGGCGTTTTTTGCTGCGA 43871 | || | | |||| ||| ||| |||| || || || || || |||||||| Sbjct 137309 ACAGAATGAACGAGAATGAAAGATTCTTTATTTCCAGAGTATTAGCTTTCTTTGCTGCCT 137368 Query 43872 GCGACGGGATAGTCAATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTACCA 43930 || || || |||||||| || || ||| || ||| || ||||||||| | ||| Sbjct 137369 CTGATGGTATTGTCAATGAGAACTTAGTTGAGAACTTTTCAGCT-GAAGTTCAAATTCCA 137427 Query 43931 GAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTAC 43990 ||||| ||||| ||||| || ||||| || ||||| ||||| || |||| ||| Sbjct 137428 GAAGCTAAGTGTTTCTATGGTTTCCAAATCATGATGGAAAACATTCACTCAGAAACATAC 137487 Query 43991 AGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCG 44050 | | || | || || |||||||| || | || || | || || ||||| Sbjct 137488 TCTTTGTTGTTGGACACATACATCAAGGACCCTAAGGAAAACGAATTTTTATTCAATGCC 137547 Query 44051 ATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATA-AATTC 44109 |||||||| | |||| || ||| | || || || ||||| | | |||||| || | Sbjct 137548 ATAGAAACCATTCCTGAAATCAAAGAAAAGGCCGAATGGGCTATCAGATGGATCCAAGAC 137607 Query 44110 AA--ATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTT 44167 || ||| | |||| ||| |||| || || || || | ||| || || | ||||| Sbjct 137608 AAGGATGCCTTGTTTGCCGAAAGACTGGTTGCTTTCGCTGCTGTTGAGGGTGTCTTCTTC 137667 Query 44168 TCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACG 44227 |||||||| ||||| ||||| || ||||| ||||| ||||||||||||||| ||||| Sbjct 137668 TCAGGATCCTTTGCTGCCATCTTCTGGTTGAAGAAGAAAGGTTTGATGCCTGGTTTGACA 137727 Query 44228 TTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTA 44287 || || ||||| ||||| | | || ||||| ||||| || |||||||| ||||| Sbjct 137728 TTCTCCAATGAATTAATTTGCAGAGACGAAGGTTTACACACTGACTTTGCTTGTTTGTT- 137786 Query 44288 CTTGGATATCTAGGAGACGATAAGCC---TTCATGTAAGACAATT-ACAGATATTGTTGT 44343 || | | | ||| | ||||| | || |||| || | ||| || || Sbjct 137787 GTTCTCTCATTTGAAGA--ACAAGCCAGATCCA---AAGATTGTTGAAAGA-ATCATTTC 137840 Query 44344 AGAGGCAGTAAAGATAGAACAAGA-ATTTATGACAACAGCATTACCTGTAAATTTAATAG 44402 ||| ||||| | || ||| |||| || | | || | || || ||| ||| Sbjct 137841 AGAAGCAGTTGAAATTGAA-AAGAGATACTTCATTGATGCCATTCCAGTTGCATTATTAG 137899 Query 44403 GAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGG 44462 | ||||||| |||||||| |||||| |||||| | |||| ||| | || | | | Sbjct 137900 GTATGAATGCTGACTTGATGAATCAATATGTTGAATTCGTTGCTGATAGACTATTAGTAG 137959 Query 44463 AACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTT 44522 | |||||||| || | || |||| ||| || |||||||| ||||||||||| | Sbjct 137960 CTTTAGGTTGCGAAAAGATATTTAATGTAACAAATCCATTTGATTTCATGGAAAATATAT 138019 Query 44523 CGTTGGAAGGCAAAACAAACTTTTTTGAAAA 44553 | | | || || || ||||| |||||||| Sbjct 138020 CCCTAGCTGGTAAGACCAACTTCTTTGAAAA 138050 >seq125 Length=64712 Score = 111 bits (122), Expect = 1e-19 Identities = 356/550 (65%), Gaps = 22/550 (4%) Strand=Plus/Plus Query 19244 TTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGTTT 19303 |||| || || ||| ||||| | | ||||| | |||||||||| || | | | Sbjct 17492 TTGGTGGTTTAGATAAGGAGTTCACACAGATCTTCAGAAGAGCATTTGCCTCAAGAATCT 17551 Query 19304 TTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTTATG 19363 | | || | |||||| ||||||| | |||||| || || | | |||| Sbjct 17552 TCCCACCACAAGTCATTGCTAAATTGGGTATTTCACATGTAAAGGGTCTACTATTGTATG 17611 Query 19364 GGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA---CAA 19420 | || || || || || ||||| ||||| ||| || | |||| | | | | | Sbjct 17612 GTCCTCCAGGGACCGGTAAGACATTGATTGCTAGAAAAATCGGTAACATGTTGAATGCCA 17671 Query 19421 AACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGG 19480 | ||||| || ||||| |||||||| |||||||| | ||| ||||| ||| ||| | Sbjct 17672 AGGAACCT---AAGATTGTTAATGGTCCGGAAATCTTGAGTAAGTATGTGGGTTCATCAG 17728 Query 19481 AAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAA--CAA---AAACGTTTAGG 19535 | ||||| | || ||||| || |||||| | ||| ||| ||| | | ||| Sbjct 17729 AGGAAAACATTAGAAACTTGTTCAAGGATGCTGAACAGGAATACAAGGCAAAGGGTGAGG 17788 Query 19536 GCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAG 19595 || || || || || || || | ||||||||||| | | | ||||||||| Sbjct 17789 AATCA-----TCGTTACATATCATCATCTTTGATGAATTGGATTCGGTTTTTAAGCAAAG 17843 Query 19596 AGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAA 19649 |||||| || || || || || ||| | |||||| || || | | | || Sbjct 17844 AGGTTCAAGAGGTGATGGAACAGGGGTTGGTGATAATGTTGTTAACCAGTTGTTAGCCAA 17903 Query 19650 ATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709 | | || |||||| | ||| |||| || || ||||| ||||| ||||| |||||| || Sbjct 17904 AATGGATGGTGTTGATCAATTGAACAACATATTAGTGATTGGTATGACCAATAGAAGAGA 17963 Query 19710 ATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTT 19769 | || || | ||| | ||| |||| ||| | || ||| | | | || || || || Sbjct 17964 TCTTATTGATAATGCCCTCTTAAGACCTGGTAGATTTGAAGTTCAAGTTGAGATAAAGTT 18023 Query 19770 ACCCGATGAA 19779 ||| |||||| Sbjct 18024 ACCTGATGAA 18033 >seq75 Length=157796 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 115035 GTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTCGGCT 115094 ||||| | |||||||| |||||| ||||| |||||||| || || || | || || ||| Sbjct 5286 GTCATTCTTGAAGGAATAGCATGTGGATTGATAATCAAATCAGGAACAATACCTTCAGCT 5345 Query 115095 GTGAACGGCATGTCGTGCTGATC-GTACATCATTCCACAAGTTCCTTTTTGAGCGGTAAA 115153 || ||||||||||| | || || ||| | || ||| || || |||||| | Sbjct 5346 GTAAACGGCATGTC-TTCTCTTCTGTAAGTAATACCAATGGTACCCTTTTGACCATGTCT 5404 Query 115154 CGATGCAAATTTATCACCAATCTCAGGTTCTCTGATTTTTCTCAGACGTATCTTCAC 115210 |||||||| ||||||||||| | ||| || || || |||||| | || ||| || Sbjct 5405 GGATGCAAACTTATCACCAATTTGAGGCACTTTGGTTGTTCTCACTCTTACCTTAAC 5461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397454992449040